BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13990 (UTR included)
(1312 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2249_C1 488 e-137
BF14_1796_C1 228 2e-59
BF01062A1H02 151 3e-36
BF01025A1A12 78 4e-14
BF01022A1G02 72 2e-12
BF01058A1C03 70 1e-11
BF01042A2B06 68 4e-11
>BF14_2249_C1
Length = 1315
Score = 488 bits (246), Expect = e-137
Identities = 380/425 (89%)
Strand = Plus / Plus
Query: 888 cagtggcgtgcatagaggtttggggtagggtaagcagaatatgtttgaaaaataaattcc 947
|||||||||||| |||| ||||||||||||| |||| |||||||||| |||| | || |
Sbjct: 227 cagtggcgtgcacagagatttggggtagggtgagcaaaatatgtttggaaaaaatatact 286
Query: 948 aattttcatcatttcctcttctaaaacattgataataatgaggtctttcgcaagcattca 1007
|||||| |||||||||||||||||||||||||||||||| ||||||||| |||| |||||
Sbjct: 287 aatttttatcatttcctcttctaaaacattgataataataaggtctttcacaagtattca 346
Query: 1008 tttaaatgaaactaatattttcggattactacgcgtcatttataatgattatgcagacga 1067
||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||
Sbjct: 347 tttaaatgaaactaatattttcggattgctacgcgtaatttataattgttatgcagacga 406
Query: 1068 gatgtctgcagtgatcagggttgctgctaagtaatcagaatgtcgggagtgtgtaatccg 1127
||||||||||||||||| |||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 407 gatgtctgcagtgatcacggttgctgctgagtaatcggaatgtcgggagaatgtaatccg 466
Query: 1128 aacatattagtttcattttaacattgataatattcgcgcataatgtatatatgaatgtaa 1187
|| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 467 aaaatattagtttcatttaaacattgataatattcgcgcataatgtataaatgaatgtaa 526
Query: 1188 tgaatctctcaattacctctgagccacgaaagtaccttaaaacgattacaatctgttcat 1247
|||||||||||| |||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 527 tgaatctctcaaccgcctctgagccacgagagaaccttaaaacgattaagatctgttcat 586
Query: 1248 cgccgctttataaaagttattttaatcgcaatattgagtggagatcctcacattattctt 1307
| ||| ||| |||||||||| ||||| ||||| ||||||||||| ||||| || ||
Sbjct: 587 caccgnttttaaaaagttattaaaatcggaatatccagtggagatccaaacattcttatt 646
Query: 1308 attat 1312
|||||
Sbjct: 647 attat 651
>BF14_1796_C1
Length = 1261
Score = 228 bits (115), Expect = 2e-59
Identities = 127/131 (96%)
Strand = Plus / Plus
Query: 180 agttctactcaccaaccagagactactccaaggaggagtctcccgctcctaagtactgaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 agttctactcaccaaccagagactactccaaggaggagtctcccgctcctaagtactgaa 346
Query: 240 cactcgttgcaagtgtttccgacagttatgtattagatattttaatttaataaatagtgc 299
|||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 347 cactcgctgcaagtgtttccgacagttatgtattagaaattttaatttaataaatagtga 406
Query: 300 tatgtaataca 310
|| ||||||||
Sbjct: 407 taggtaataca 417
>BF01062A1H02
Length = 876
Score = 151 bits (76), Expect = 3e-36
Identities = 142/162 (87%), Gaps = 4/162 (2%)
Strand = Plus / Plus
Query: 892 ggcgtgcatagaggtttggggtagggtaagcagaatatgtttgaaaaataaattccaatt 951
|||||||| |||| || ||| ||||||||||||||||||||||||||| |||| ||||||
Sbjct: 93 ggcgtgcacagagattcgggttagggtaagcagaatatgtttgaaaaa-aaataccaatt 151
Query: 952 ttcatcat---ttcctcttctaaaacattgataataatgaggtctttcgcaagcattcat 1008
||||| || |||||| |||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 152 ttcataataatttcctcctctaaaccattgataataatgaaatctttcgcaagtattcat 211
Query: 1009 ttaaatgaaactaatattttcggattactacgcgtcatttat 1050
|||||| ||||||||||||| |||| |||| ||||||||||
Sbjct: 212 ttaaataaaactaatattttaggatcactaatcgtcatttat 253
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1119 tgtaatccgaacatattagtttcattttaacattgataatattcgcgcat 1168
||||||||||| ||||||||||||||| ||| |||||||| |||||||||
Sbjct: 353 tgtaatccgaaaatattagtttcatttaaactttgataatgttcgcgcat 402
>BF01025A1A12
Length = 880
Score = 77.8 bits (39), Expect = 4e-14
Identities = 88/103 (85%), Gaps = 6/103 (5%)
Strand = Plus / Minus
Query: 946 ccaattttcatcat---ttcctcttctaaaacattgataat---aatgaggtctttcgca 999
|||||||||||||| |||||| |||||| |||||||||| |||||| ||||| ||
Sbjct: 323 ccaattttcatcataacttcctcctctaaaccattgataatcataatgagatcttttaca 264
Query: 1000 agcattcatttaaatgaaactaatattttcggattactacgcg 1042
| |||||||||||||||||||||| |||||||| ||||||||
Sbjct: 263 ataattcatttaaatgaaactaatactttcggatcactacgcg 221
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 1123 atccgaacatattagtttcattttaacattgataatattcgcgcataa 1170
||||||| ||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 109 atccgaaaatattagtttcatttaaacattgataatattcgcgtataa 62
>BF01022A1G02
Length = 638
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1004 ttcatttaaatgaaactaatattttcggattactacgcgt 1043
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 526 ttcatttaaatgaagctaatattttcggattactacgcgt 565
>BF01058A1C03
Length = 779
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 994 ttcgcaagcattcatttaaatgaaactaatattttcggattac 1036
||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 523 ttcgcgagtattcatttaaatgaaactaatattttcggattac 481
>BF01042A2B06
Length = 781
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 992 ctttcgcaagcattcatttaaatgaaactaatattttcggattactacgcgtcattta 1049
||||||| || |||| ||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 358 ctttcgcgagtattcgtttaaattaaagtaatattttcggattactacgcgttattta 301
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 160,779
Number of extensions: 3472
Number of successful extensions: 3472
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 3467
Number of HSP's successfully gapped: 9
Length of query: 1312
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1295
Effective length of database: 8,119,229
Effective search space: 10514401555
Effective search space used: 10514401555
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)