BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13996 (UTR included)
(2539 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2108_C1 1624 0.0
>BF14_2108_C1
Length = 1504
Score = 1624 bits (819), Expect = 0.0
Identities = 825/827 (99%)
Strand = Plus / Plus
Query: 906 ggtggcaaggagtggcgacgctcggcgctggccgcagcactggcgggtgaggtctccgtg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ggtggcaaggagtggcgacgctcggcgctggccgcagcactggcgggtgaggtctccgtg 737
Query: 966 gttccatcttcacgtctcctagcgctgctgggtcaggcgctgaagtggcagcagcatcag 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gttccatcttcacgtctcctagcgctgctgggtcaggcgctgaagtggcagcagcatcag 797
Query: 1026 ggtctactgccgccaggaaccaccattgatttgttcagaggcaaagctgctattagggac 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ggtctactgccgccaggaaccaccattgatttgttcagaggcaaagctgctattagggac 857
Query: 1086 gaagaagatgaccaatacccgacacaagtgtcaaagattataaaatttggccaaaaatct 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gaagaagatgaccaatacccgacacaagtgtcaaagattataaaatttggccaaaaatct 917
Query: 1146 catgttgagtgtgcaaagttttcccccgacggccagtacttggtgacggggtccgtggac 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 catgttgagtgtgcaaagttttcccccgacggccagtacttggtgacggggtccgtggac 977
Query: 1206 gggctggtggaagtgtggaacttcacgacgggcaagatccgcaaggatctgcggtaccag 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 gggctggtggaagtgtggaacttcacgacgggcaagatccgcaaggatctgcggtaccag 1037
Query: 1266 gcgctcgaagagtacatgagcatggaggaagccgtgctcagcctggccttcgcgagagac 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 gcgctcgaagagtacatgagcatggaggaagccgtgctcagcctggccttcgcgagagac 1097
Query: 1326 tccgacacgctggcggccggagccaacgatggccgcgtcaaggtgtggagggtcgccagc 1385
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1098 tccgacacgctggcggccggagccaacgatggccgcgtaaaggtgtggagggtcgccagc 1157
Query: 1386 ggacaggtgcagcgcaagttggagcgagcccacgccaagggagtcacgtgtctgcagttc 1445
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1158 ggacaggtgcagcgcaagttggagcgagcacacgccaagggagtcacgtgtctgcagttc 1217
Query: 1446 gccagagacaatactcagatactgtccgcctccttcgaccgaaccatcaggatccacgga 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1218 gccagagacaatactcagatactgtccgcctccttcgaccgaaccatcaggatccacgga 1277
Query: 1506 ttgaagtcgggaaagattttaaaagaatttcgaggtcatacgtcgttcgtgaacgaggct 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1278 ttgaagtcgggaaagattttaaaagaatttcgaggtcatacgtcgttcgtgaacgaggct 1337
Query: 1566 gtgttcaccccggatggacacagcgtgctaagcgcttcctccgacggcacggtcaaggtg 1625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 gtgttcaccccggatggacacagcgtgctaagcgcttcctccgacggcacggtcaaggtg 1397
Query: 1626 tggtcggtgcgctccggggagtgtacggcgacgttgaagccgctggggtctggggagccg 1685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1398 tggtcggtgcgctccggggagtgtacggcgacgttgaagccgctggggtctggggagccg 1457
Query: 1686 cccgtcaactcgctgctgctgatgcccaagaacccggatcacttcgt 1732
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1458 cccgtcaactcgctgctgctgatgcccaagaacccggatcacttcgt 1504
Score = 1219 bits (615), Expect = 0.0
Identities = 615/615 (100%)
Strand = Plus / Plus
Query: 294 gaaatgtttagcaaacaagcattaatgagttaaaagctatcgtcaaaaaattaaattcaa 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gaaatgtttagcaaacaagcattaatgagttaaaagctatcgtcaaaaaattaaattcaa 71
Query: 354 ctttctaggattatacaatttatagatcctataacagttaataaataaatcctaatataa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ctttctaggattatacaatttatagatcctataacagttaataaataaatcctaatataa 131
Query: 414 ataataaatcagatgacccttacttatatacactcctaatttcaattgcttcaaatattg 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ataataaatcagatgacccttacttatatacactcctaatttcaattgcttcaaatattg 191
Query: 474 aaaagttgctatttctttacaattactatgtctatcgaaattgaatctgcagatgttatc 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aaaagttgctatttctttacaattactatgtctatcgaaattgaatctgcagatgttatc 251
Query: 534 cgtctgatacaacaatacttgaaggagtctaacctcacaaaaactttgcaaacgttacag 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cgtctgatacaacaatacttgaaggagtctaacctcacaaaaactttgcaaacgttacag 311
Query: 594 gaggagacaggggtttcattgaacacagttgatagtgttgatggattttgtgccgacata 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gaggagacaggggtttcattgaacacagttgatagtgttgatggattttgtgccgacata 371
Query: 654 aataatggtcactgggataccgtgttaaaagcaacagcatcattaaagctgcctgataag 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aataatggtcactgggataccgtgttaaaagcaacagcatcattaaagctgcctgataag 431
Query: 714 aaacttatggatttatatgaacaagtggtcttggaactcattgagttacgtgagctgggt 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aaacttatggatttatatgaacaagtggtcttggaactcattgagttacgtgagctgggt 491
Query: 774 gccgctcgaacattgttgcgccaaacccagccctgcttgctcatgaagcaacaggagacg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gccgctcgaacattgttgcgccaaacccagccctgcttgctcatgaagcaacaggagacg 551
Query: 834 gatagatacatgcatcttgaaaatatgttggctcgatcatatttcgatcctcgggaagca 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gatagatacatgcatcttgaaaatatgttggctcgatcatatttcgatcctcgggaagca 611
Query: 894 tacggagctggtggt 908
|||||||||||||||
Sbjct: 612 tacggagctggtggt 626
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 272,373
Number of extensions: 5685
Number of successful extensions: 5685
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5684
Number of HSP's successfully gapped: 2
Length of query: 2539
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2522
Effective length of database: 8,119,229
Effective search space: 20476695538
Effective search space used: 20476695538
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)