BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14003 (UTR included)
(1939 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 115 3e-25
BF14_335_C4 107 7e-23
BF01049B1F01 101 4e-21
BF14_335_C5 101 4e-21
BF01043B1E03 100 2e-20
BF01047B2H03 94 1e-18
BF01016B1E06 92 4e-18
BF01016A2B02 72 4e-12
BF01019A1H08 72 4e-12
BF01021A2B11 70 1e-11
>BF14_335_C2
Length = 1827
Score = 115 bits (58), Expect = 3e-25
Identities = 201/243 (82%), Gaps = 13/243 (5%)
Strand = Plus / Plus
Query: 103 gttgcagggagaggagcttcaacagtgcatgggacttgcgactcaggtttaag-----gg 157
|||||||||||||||||||||||||||| ||||| ||||||| ||||| || | |
Sbjct: 864 gttgcagggagaggagcttcaacagtgcctgggatttgcgacacaggtgtaggtttaaga 923
Query: 158 gcccttatctaacgcgccttaa--acactcacctccaccgtccaagctcttctctttacc 215
|||| |||||||| ||| | | || |||||||||||||||||||||| ||||| ||
Sbjct: 924 gcccctatctaactcgcgtacataacgctcacctccaccgtccaagctcctctct---cc 980
Query: 216 taaccaaatgtcgaaaagaaccttctaggagtgcctttgaaatacgtcc-aagaatgaat 274
||||||||| | |||| |||||| |||| || ||| ||| ||||| | |||||||||
Sbjct: 981 taaccaaattt-gaaacgaacctactagagctgtcttcgaagtacgttcgaagaatgaac 1039
Query: 275 tt-tgttaattctggacaggcccaagtcttttagtaggttgtagagagattcagctgtta 333
| ||||| |||||||||||||||||| |||||||||| |||||||||||| ||||||||
Sbjct: 1040 tggtgttagttctggacaggcccaagtattttagtaggctgtagagagatttagctgtta 1099
Query: 334 tac 336
|||
Sbjct: 1100 tac 1102
>BF14_335_C4
Length = 1491
Score = 107 bits (54), Expect = 7e-23
Identities = 104/121 (85%), Gaps = 6/121 (4%)
Strand = Plus / Minus
Query: 110 ggagaggagcttcaacagtgcatgggacttgcgactcaggt------ttaaggggccctt 163
||||||||||||||||||||| ||||||||||||| ||||| |||||||||| ||
Sbjct: 1302 ggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtttaaggggccttt 1243
Query: 164 atctaacgcgccttaaacactcacctccaccgtccaagctcttctctttacctaaccaaa 223
|||| |||||| |||||| |||||||| || ||||||||| ||||| ||||||||||||
Sbjct: 1242 atcttacgcgcattaaacgctcacctcaactttccaagctcctctctctacctaaccaaa 1183
Query: 224 t 224
|
Sbjct: 1182 t 1182
>BF01049B1F01
Length = 840
Score = 101 bits (51), Expect = 4e-21
Identities = 105/122 (86%), Gaps = 7/122 (5%)
Strand = Plus / Plus
Query: 103 gttgcagggagaggagcttcaacagtgcatgggacttgcgactc------aggtttaagg 156
|||||||||||||||||||||||||||| ||||||||||||| | |||| |||||
Sbjct: 588 gttgcagggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtgtaagg 647
Query: 157 ggcccttatctaacgcgccttaaacactcacctccaccgtccaagctcttctctttacct 216
||||| |||||||| | | |||||||| |||||| ||||||||||||| ||||| |||||
Sbjct: 648 ggccc-tatctaactcccgttaaacacccacctctaccgtccaagctcctctctctacct 706
Query: 217 aa 218
||
Sbjct: 707 aa 708
>BF14_335_C5
Length = 1597
Score = 101 bits (51), Expect = 4e-21
Identities = 101/119 (84%), Gaps = 6/119 (5%)
Strand = Plus / Minus
Query: 104 ttgcagggagaggagcttcaacagtgcatgggacttgcgactc------aggtttaaggg 157
||||| ||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 1556 ttgcacggagaggagcttcaacagtgcctgggacttgcgannnnngtgtaggtttaaggc 1497
Query: 158 gcccttatctaacgcgccttaaacactcacctccaccgtccaagctcttctctttacct 216
|||| | |||||||||| |||||| |||||||||||||||||||||| ||||| |||||
Sbjct: 1496 gcccctgtctaacgcgcattaaacgctcacctccaccgtccaagctcctctctctacct 1438
>BF01043B1E03
Length = 830
Score = 99.6 bits (50), Expect = 2e-20
Identities = 160/192 (83%), Gaps = 6/192 (3%)
Strand = Plus / Minus
Query: 147 aggtttaaggggcccttatctaacgcgccttaaacactcacctccaccgtccaagctctt 206
|||||||| |||||| |||||||||||| |||| ||||||||||| ||||||| || |
Sbjct: 403 aggtttaaagggcccctatctaacgcgcgttaagtgctcacctccactgtccaaggtcct 344
Query: 207 ctctttacctaaccaaatgtcgaaaagaaccttctaggagtgcctttgaaatacg-tcca 265
|||| ||||||||||||| | |||| ||| ||||| |||||||| | |||| ||||
Sbjct: 343 ctctctacctaaccaaat-ttgaaacaaac---ctaggcctgcctttgcagtacgttcca 288
Query: 266 agaatgaatt-ttgttaattctggacaggcccaagtcttttagtaggttgtagagagatt 324
||||||| || ||||| |||||| ||||| ||||| ||| ||||||||||||||||||
Sbjct: 287 agaatgatttgatgttagttctgggcaggctcaagtgtttcagtaggttgtagagagatg 228
Query: 325 cagctgttatac 336
|||||||||||
Sbjct: 227 aagctgttatac 216
>BF01047B2H03
Length = 758
Score = 93.7 bits (47), Expect = 1e-18
Identities = 111/129 (86%), Gaps = 5/129 (3%)
Strand = Plus / Plus
Query: 477 tttaaaattcgtaaatacataaa-tatgtctggtctgga---cgacgcacaaatatgctc 532
||||||||||| |||| ||||| ||||||||||||||| |||| ||||| |||||||
Sbjct: 2 tttaaaattcgcgaatatataaaatatgtctggtctggaaaccgacacacaa-tatgctc 60
Query: 533 tggagttttgtattgtttctcatacgtatccatcattatcgtgcaatccgaagccgcttt 592
|| |||||||| ||| | ||||||||||||| ||||| |||||||||||| |||||||
Sbjct: 61 ggggattttgtatcgttccccatacgtatccatgattatagtgcaatccgaaaccgcttt 120
Query: 593 aaggataga 601
|||||||||
Sbjct: 121 aaggataga 129
>BF01016B1E06
Length = 606
Score = 91.7 bits (46), Expect = 4e-18
Identities = 109/128 (85%), Gaps = 9/128 (7%)
Strand = Plus / Plus
Query: 103 gttgcagggagaggagcttcaacagtgcatgggacttgcgactcaggt------ttaagg 156
||||||| |||||||||||||||||||| |||| | ||||| ||||| ||||||
Sbjct: 193 gttgcagagagaggagcttcaacagtgccggggagtagcgacccaggtgtaggtttaagg 252
Query: 157 ggcccttatctaacgcgccttaaacactcacctccaccgtccaagctcttctctttacct 216
|||||| |||||||||| |||||| |||||||||||||||||| ||| ||||| |||||
Sbjct: 253 ggccct-atctaacgcg--ttaaacgctcacctccaccgtccaatctcctctctctacct 309
Query: 217 aaccaaat 224
||||||||
Sbjct: 310 aaccaaat 317
>BF01016A2B02
Length = 780
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 103 gttgcagggagaggagcttcaacagtgcatgggacttgcgactcaggt 150
|||| ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 225 gttgaagggagaggagcttcaacagtgcctgggaattgcgactcaggt 272
>BF01019A1H08
Length = 504
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 103 gttgcagggagaggagcttcaacagtgcatgggacttgcgactcaggt 150
|||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 420 gttgcagggagaggagcttcaacagtgcctgggagttgcgacccaggt 467
>BF01021A2B11
Length = 729
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 147 aggtttaaggggcccttatctaacgcgccttaaacactcacctccaccgtccaagctctt 206
||||| |||| |||| ||||||| ||| |||||| |||||||||||||||||||||| |
Sbjct: 436 aggttgaaggcgccccgatctaacacgcgttaaacgctcacctccaccgtccaagctcct 377
Query: 207 ctctttacctaaccaaat 224
||||| |||||||||||
Sbjct: 376 ctctt--cctaaccaaat 361
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,684
Number of extensions: 4155
Number of successful extensions: 4155
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 4153
Number of HSP's successfully gapped: 12
Length of query: 1939
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1922
Effective length of database: 8,119,229
Effective search space: 15605158138
Effective search space used: 15605158138
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)