BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14012 (UTR included)
(2122 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_601_C1 1715 0.0
BF01050A1A06 111 5e-24
>BF14_601_C1
Length = 893
Score = 1715 bits (865), Expect = 0.0
Identities = 886/893 (99%)
Strand = Plus / Plus
Query: 340 gatatatcatttgtcaatgtcaagaatctgatttcagattatcattttgttggcgttaga 399
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gatataccatttgtcaatgtcaagaatctgatttctgattatcattttgttggcgttaga 60
Query: 400 agaaaacggattagttgttcacaattaaatagaccaaataagaaaatataaacatggatt 459
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaaacgaattagttgttcacaattaaatagaccaaataagaaaatataaacatggatt 120
Query: 460 ctatgagagagaaggcttttcaagattatcgaaagaagttaatggaacacaaagaagtgg 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctatgagagagaaggcttttcaagattatcgaaagaagttaatggaacacaaagaagtgg 180
Query: 520 aatcaaggcttaaagatatgcgcgaacagttgaaagacctcaccaaacagtacgacaaaa 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatcaaggcttaaagatatgcgcgaacagttgaaagacctcaccaaacagtacgacaaaa 240
Query: 580 gtgagaatgatctaaaagcactgcaaagtgttggccagatagttggagaagtcctgaagc 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgagaatgatctaaaagcactgcaaagtgttggccagatagttggagaagtcctgaagc 300
Query: 640 agctgactgaggagaaattcattgtaaaagctacaaatggtcctcgttatgttgttggtt 699
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 301 agctgactgaggagaaattcattgtaaaagctacaaatggtcctcgttatgtggtcggtt 360
Query: 700 gtcgtcgtcagcttgacaagaataggttgaaaggtggaactcgagttgctctagatatga 759
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 361 gtcgtcgtcagcttgacaagaataggttgaaaggtggaactcgagttgctctggatatga 420
Query: 760 caacgctaactataatgagacatctgccgagggaggtggatcccttagtatacaacatga 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caacgctaactataatgagacatctgccgagggaggtggatcccttagtatacaacatga 480
Query: 820 gtcacgaagatcccggtgacgtgacatattcagctattggtggtctccaagaacagatac 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtcacgaagatcccggtgacgtgacatattcagctattggtggtctccaagaacagatac 540
Query: 880 gacagttgagagaggttatagagttacctctgatgaatcccgagctgtttgtccgtgttg 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gacagttgagagaggttatagagttacctctgatgaatcccgagctgtttgtccgtgttg 600
Query: 940 gcatcacacctcccaagggttgcctcctgtatggaccacctggtaccggaaagacactac 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcatcacacctcccaagggttgcctcctgtatggaccacctggtaccggaaagacactac 660
Query: 1000 tcgctagggctgtcgcttctcaattagacgctaacttcctcaaggtggtgtcctcggcta 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcgctagggctgtcgcttctcaattagacgctaacttcctcaaggtggtgtcctcggcta 720
Query: 1060 ttgttgataaatatatcggagaatcagctcgtctcatccgtgagatgttcaactatgctc 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttgttgataaatatatcggagaatcagctcgtctcatccgtgagatgttcaactatgctc 780
Query: 1120 gtgaccaccaaccgtgtatcatatttatggatgaaattgatgctatcggtgggagacgtt 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtgaccaccaaccgtgtatcatatttatggatgaaattgatgctatcggtgggagacgtt 840
Query: 1180 tctccgaagggacgagcgccgatagagagatacaaagaaccctcatggaactc 1232
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 841 tctccgaagggacgagcgctgatagagagatacaaagaaccctcatggaactc 893
>BF01050A1A06
Length = 653
Score = 111 bits (56), Expect = 5e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 2042 gagaaagaaagatacacaaatgcagaaagtaggagagagaaagagagcgagtcggtagat 2101
|||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 523 gagagagaaagatacacaaatgtagaaagtaggagagagaaagagagtgagtcggtagat 582
Query: 2102 tccaagcacatg 2113
||||||| ||||
Sbjct: 583 tccaagctcatg 594
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 254,053
Number of extensions: 5699
Number of successful extensions: 5699
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5699
Number of HSP's successfully gapped: 2
Length of query: 2122
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2105
Effective length of database: 8,119,229
Effective search space: 17090977045
Effective search space used: 17090977045
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)