BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14017 (UTR included)
(1228 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 238 2e-62
BF01056B1D02 216 6e-56
BF01052B1H02 208 2e-53
BF01031B1E12 178 1e-44
BF01010B2F09 153 8e-37
BF01037B1H08 127 4e-29
BF01040A1G09 115 2e-25
BF01029B2F12 109 1e-23
BF01062A1A05 107 4e-23
>BF01023A2A12
Length = 723
Score = 238 bits (120), Expect = 2e-62
Identities = 183/204 (89%)
Strand = Plus / Plus
Query: 1023 tgtactttctaagagtgtttagacaccactgacggacggcgaaggaaaacattgtgagga 1082
|||||||||||| ||| |||||||||||||||||||||| |||||| ||| | |||||||
Sbjct: 145 tgtactttctaacagtatttagacaccactgacggacggtgaaggagaacgtcgtgagga 204
Query: 1083 aacctggtcttataattacaaattataagattgaaatcgccaacccggcttgagcaagcg 1142
||||||||||||||||| ||||||||||| |||||||| |||| | | ||||||| ||||
Sbjct: 205 aacctggtcttataatttcaaattataagtttgaaatcaccaatcagccttgagcgagcg 264
Query: 1143 tggtgattaatgctctaaccttctccatgtgagaaaaggccttggctcagtagtgggctc 1202
|||||||||||||||||||||||||||||||| || ||||||| |||||| |||| ||||
Sbjct: 265 tggtgattaatgctctaaccttctccatgtgataagaggcctttgctcagcagtgagctc 324
Query: 1203 caaaagactgatgatgatgatgat 1226
| | || |||||||||||||||||
Sbjct: 325 cgataggctgatgatgatgatgat 348
>BF01056B1D02
Length = 778
Score = 216 bits (109), Expect = 6e-56
Identities = 181/204 (88%), Gaps = 7/204 (3%)
Strand = Plus / Plus
Query: 1023 tgtactttctaagagtgtttagacaccactgacggacggcgaaggaaaacattgtgagga 1082
||||||||||||| || ||||||||||||||||| |||||||||| | |||||||
Sbjct: 550 tgtactttctaagggtagttagacaccactgacggt----gaaggaaaacgtcgtgagga 605
Query: 1083 aacctggtcttataattacaaattataagattgaaatcgccaacccggcttgagcaagcg 1142
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 606 aacctggtcttataatttcaaattataagattgaaatcgccaacccgtcttgagcaagcg 665
Query: 1143 tggtgattaatgctctaaccttctccatgtgagaaaaggccttggctcagtagtgggctc 1202
||||| |||||||||||||||| |||||||||| ||||||| |||||| |||||||||
Sbjct: 666 tggtggttaatgctctaacctt---catgtgagaagaggcctttgctcagcagtgggctc 722
Query: 1203 caaaagactgatgatgatgatgat 1226
| | || |||||||| ||||||||
Sbjct: 723 cgataggctgatgataatgatgat 746
>BF01052B1H02
Length = 790
Score = 208 bits (105), Expect = 2e-53
Identities = 159/177 (89%)
Strand = Plus / Minus
Query: 1026 actttctaagagtgtttagacaccactgacggacggcgaaggaaaacattgtgaggaaac 1085
||||| ||||||| ||||||||| |||||||||||| |||||||||||| ||||||||||
Sbjct: 463 actttttaagagtatttagacactactgacggacggtgaaggaaaacatcgtgaggaaac 404
Query: 1086 ctggtcttataattacaaattataagattgaaatcgccaacccggcttgagcaagcgtgg 1145
|||||||||||||| |||| || || ||||||||||||||||| |||||||||||||||
Sbjct: 403 ctggtcttataatttgaaataattagtttgaaatcgccaacccgtcttgagcaagcgtgg 344
Query: 1146 tgattaatgctctaaccttctccatgtgagaaaaggccttggctcagtagtgggctc 1202
|| ||||||||||||| ||||||||| |||||||||| || ||||| |||||||||
Sbjct: 343 tgcttaatgctctaactttctccatgggagaaaaggcgtttgctcaacagtgggctc 287
>BF01031B1E12
Length = 730
Score = 178 bits (90), Expect = 1e-44
Identities = 127/138 (92%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 1041 ttagacaccactgacggacggcgaaggaaaacattgtgaggaaacctggtcttataatta 1100
|||| ||||||||| ||||| || ||||||||| |||||||||||||||||||| ||||
Sbjct: 36 ttaggcaccactgagagacggtgagggaaaacatcgtgaggaaacctggtcttatgatta 95
Query: 1101 -caaattataagattgaaatcgccaacccggcttgagcaagcgtggtgattaatgctcta 1159
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 96 gcaaagtataagattgaaatcgccaacccgtcttgagcaagcgtggtgattaatgctcta 155
Query: 1160 accttctccatgtgagaa 1177
||||||||| ||||||||
Sbjct: 156 accttctccgtgtgagaa 173
>BF01010B2F09
Length = 764
Score = 153 bits (77), Expect = 8e-37
Identities = 137/155 (88%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 1023 tgtactttctaagagtgtttagacaccactgacggacggcgaaggaaaacattgtgagga 1082
|||||||||||||||| ||||||| |||||||||||||| |||||| || || |||||
Sbjct: 455 tgtactttctaagagtatttagacgccactgacggacggtgaaggagaatat---gagga 399
Query: 1083 aacctggtcttataattacaaattataagattgaaatcgccaacccggcttgagcaagcg 1142
||||||| || |||| | ||||||||| ||| |||||||||| ||| ||||||| ||||
Sbjct: 398 aacctggatttgtaataa-aaattataaaattaaaatcgccaatccgtcttgagcgagcg 340
Query: 1143 tggtgattaatgctctaaccttctccatgtgagaa 1177
|||||||||||||||||||||||||||||||||||
Sbjct: 339 tggtgattaatgctctaaccttctccatgtgagaa 305
>BF01037B1H08
Length = 758
Score = 127 bits (64), Expect = 4e-29
Identities = 100/112 (89%)
Strand = Plus / Plus
Query: 1112 attgaaatcgccaacccggcttgagcaagcgtggtgattaatgctctaaccttctccatg 1171
||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 238 attgaaatcgccaccccgtcttgagcaagcgtggtgcttaatgctctaaccttctacatg 297
Query: 1172 tgagaaaaggccttggctcagtagtgggctccaaaagactgatgatgatgat 1223
|||||| ||||||| |||||| ||||||||| | || |||||| |||||||
Sbjct: 298 tgagaagaggcctttgctcagctgtgggctccgataggctgatggtgatgat 349
>BF01040A1G09
Length = 753
Score = 115 bits (58), Expect = 2e-25
Identities = 112/130 (86%)
Strand = Plus / Plus
Query: 1096 aattacaaattataagattgaaatcgccaacccggcttgagcaagcgtggtgattaatgc 1155
|||| ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 10 aatttcaaattataagtttgaaatcgccaacccatcttgagcaagcgtggcgattaatgc 69
Query: 1156 tctaaccttctccatgtgagaaaaggccttggctcagtagtgggctccaaaagactgatg 1215
| ||||||||||||| ||||| |||| | |||||| ||||| ||| | || ||||||
Sbjct: 70 ttaaaccttctccatgcgagaagaggcttatgctcagcagtggcttccgataggctgatg 129
Query: 1216 atgatgatga 1225
||||||||||
Sbjct: 130 atgatgatga 139
>BF01029B2F12
Length = 749
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 1023 tgtactttctaagagtgtttagacaccactgacggacggcgaaggaaaacattgtgagga 1082
|||||||||||||||| |||||||||||||||||||||| ||||||| |||| | |||||
Sbjct: 617 tgtactttctaagagtatttagacaccactgacggacggtgaaggaagacatcgcgagga 558
Query: 1083 aacctggtcttataa 1097
|||||||||||||||
Sbjct: 557 aacctggtcttataa 543
>BF01062A1A05
Length = 777
Score = 107 bits (54), Expect = 4e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 1131 cttgagcaagcgtggtgattaatgctctaaccttctccatgtgagaaaaggccttggctc 1190
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||
Sbjct: 514 cttgagcaagcgtggtgattaatgctctaaccttctccttgtgagaagaggcctttgctt 573
Query: 1191 agtagtgggctccaaaag 1208
|| |||||||||| ||||
Sbjct: 574 agcagtgggctcctaaag 591
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 135,430
Number of extensions: 3086
Number of successful extensions: 3086
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 3080
Number of HSP's successfully gapped: 9
Length of query: 1228
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1211
Effective length of database: 8,119,229
Effective search space: 9832386319
Effective search space used: 9832386319
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)