BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14021 (UTR included)
(1561 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021A1A11 775 0.0
>BF01021A1A11
Length = 736
Score = 775 bits (391), Expect = 0.0
Identities = 397/399 (99%)
Strand = Plus / Plus
Query: 1163 taactaaatgccgcatatttttttatccttatttaatttgaaacctaattccgtttcaat 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 taactaaatgccgcatatttttttatccttatttaatttgaaacctaattccgtttcaat 69
Query: 1223 atcggcgatctaactgcgacattaccataacatctctttatttaactctcttacagtttt 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atcggcgatctaactgcgacattaccataacatctctttatttaactctcttacagtttt 129
Query: 1283 ttcatatgtaagccacatccgtttattttaactcctcttacgtcctcgatatactcgtcc 1342
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 130 ttcatatgtaagccacatccgtatattttaactcctcttacgtcctcgatatactcgtcc 189
Query: 1343 aaattacattctgtgaatccaattcacggattgatttgaatttaaatttcgatatcgatt 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aaattacattctgtgaatccaattcacggattgatttgaatttaaatttcgatatcgatt 249
Query: 1403 tattgcgatatctcatatatatttggtacctcaccaatcacttacacagcggtgctacaa 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tattgcgatatctcatatatatttggtacctcaccaatcacttacacagcggtgctacaa 309
Query: 1463 taatattttaagcactgacatattgctaatatacttatgtctccattcgaaagagcctga 1522
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 taatatttttagcactgacatattgctaatatacttatgtctccattcgaaagagcctga 369
Query: 1523 tataaagtgatgtgtcggttttctatcatttaacccaat 1561
|||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tataaagtgatgtgtcggttttctatcatttaacccaat 408
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 190,389
Number of extensions: 3807
Number of successful extensions: 3807
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3807
Number of HSP's successfully gapped: 1
Length of query: 1561
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1544
Effective length of database: 8,119,229
Effective search space: 12536089576
Effective search space used: 12536089576
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)