BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14043 (UTR included)
(2896 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040B2G02 674 0.0
>BF01040B2G02
Length = 883
Score = 674 bits (340), Expect = 0.0
Identities = 371/383 (96%), Gaps = 7/383 (1%)
Strand = Plus / Minus
Query: 2514 tatgtgcgagctccaatgcatcggcacgccgatacatggctaggctcaatcgaactatga 2573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 tatgtgcgagctccaatgcatcggcacgccgatacatggctaggctcaatcgaactatga 824
Query: 2574 aatcatcgaggctctccatgcgtaggtctctggcaatggtcgcgatccgtacgaaccgcg 2633
|||||||||||||| |||| ||| |||||||||||||||||||||||||||
Sbjct: 823 aatcatcgaggctcnnnatgc-------tctaacaatggtcgcgatccgtacgaaccgcg 771
Query: 2634 gcgcatctacaagagtccttagtgcctaacgactgctgggcttgcaggcatccgcgcccg 2693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 gcgcatctacaagagtccttagtgcctaacgactgctgggcttgcaggcatccgcgcccg 711
Query: 2694 gttttctagaccgaagcatactaggcgggagcgacgtaagttaggcgcgatttgatgtta 2753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gttttctagaccgaagcatactaggcgggagcgacgtaagttaggcgcgatttgatgtta 651
Query: 2754 gtcttgtagactgccagcttagctcggagggggagatccgatcggagaactggtcgcagg 2813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gtcttgtagactgccagcttagctcggagggggagatccgatcggagaactggtcgcagg 591
Query: 2814 agaacacgcgcggctcgcgtcttgtcgacaacttccttcacgtggaacttcattgtcagt 2873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 agaacacgcgcggctcgcgtcttgtcgacaacttccttcacgtggaacttcattgtcagt 531
Query: 2874 tggcggtcgatggtcacgccaag 2896
|||||||||||||||||||||||
Sbjct: 530 tggcggtcgatggtcacgccaag 508
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 297,665
Number of extensions: 5129
Number of successful extensions: 5129
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5129
Number of HSP's successfully gapped: 2
Length of query: 2896
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2878
Effective length of database: 8,109,745
Effective search space: 23339846110
Effective search space used: 23339846110
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)