BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14044 (UTR included)
(3388 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2051_C1 1703 0.0
>BF14_2051_C1
Length = 1003
Score = 1703 bits (859), Expect = 0.0
Identities = 891/899 (99%), Gaps = 2/899 (0%)
Strand = Plus / Plus
Query: 2492 tgtcattaatctggccgctgagaaaacatacaacaacctagacgtgtctctaaaaaaggc 2551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtcattaatctggccgctgagaaaacatacaacaacctagacgtgtctctaaaaaaggc 60
Query: 2552 taacgagcatcgcaacgaatggttcgagggtgttcagaaatgcaatctggacgagacgtt 2611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taacgagcatcgcaacgaatggttcgagggtgttcagaaatgcaatctggacgagacgtt 120
Query: 2612 gtacgaagtcatggagagaattgtgcgggctgaggtgcatcgtctcgtggttgttaacga 2671
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 gtacgaagtcatggagagaattgtacgggctgaggtgcatcgtctcgtggttgttaacga 180
Query: 2672 ggatgataaagtgacgggcataatatcactgtccgatttgttgatgtatttagtgttacg 2731
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggatgataaagtgacgggtataatatcactgtccgatttgttgatgtatttagtgttacg 240
Query: 2732 tccgaccggtgactgtgaaggcgccagtctcaggaacgagcacggacccattgaagagaa 2791
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 241 tccgaccggtgactgtgaaggcgccagtcttaggaacgagcacggacccattgaagagaa 300
Query: 2792 agacgagactaccaacacggaagacaaaccgactgacgaagataagaagctcatcactac 2851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agacgagactaccaacacggaagacaaaccgactgacgaagataagaagctcatcactac 360
Query: 2852 tgacacagaaaccacccaacaggagtgccaacatt-aaaaaaaaacaatcaaacggagtg 2910
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 tgacacagaaaccaaccaacaggagtgccaacattaaaaaaaaaacaatcaaacggagtg 420
Query: 2911 ccaacgttgaaataatgtgttttgttttaactcagggctgactacgatctatgtggagta 2970
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccaatgttgaaataatgtgttttgttttaactcagggctgactacgatctatgtggagta 480
Query: 2971 taaattgtttttgttgatttctccatcaattaacttatattgatgtcgcagatgatcttt 3030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taaattgtttttgttgatttctccatcaattaacttatattgatgtcgcagatgatcttt 540
Query: 3031 ccgtgtttcataaacgctacagcgttctattttatattccactttattgtactatattat 3090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccgtgtttcataaacgctacagcgttctattttatattccactttattgtactatattat 600
Query: 3091 ttaattttttttgtatgtccgtaaatcatgatgttattttttttttaatttcaatttgtg 3150
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 601 ttaattttttttgtatgtccgtaaatcatgatgttatttttttttaaatttcaatttgtg 660
Query: 3151 gttgatatcagaatgtcagtagcgatagttaataatatagtg-tttttttatagaaatcc 3209
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 661 gttgatatcagaatgtcagtagcgatagttaataatatagtgttttttttatagaaatcc 720
Query: 3210 aaagtgaagctccttcgatatacaaatttttgtctaagaatattttatagattgtttttt 3269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaagtgaagctccttcgatatacaaatttttgtctaagaatattttatagattgtttttt 780
Query: 3270 tcttattttatgatgacttgtatatttggaatattttctttttctactaatattaccaac 3329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tcttattttatgatgacttgtatatttggaatattttctttttctactaatattaccaac 840
Query: 3330 aattttgactttagtataggtttatttttaatacacatattatatattttagataacga 3388
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aattttgactttagtataggtttatttttaatacacatattatatattttagataacga 899
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 412,342
Number of extensions: 9077
Number of successful extensions: 9077
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9075
Number of HSP's successfully gapped: 1
Length of query: 3388
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3370
Effective length of database: 8,109,745
Effective search space: 27329840650
Effective search space used: 27329840650
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)