BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14066 (UTR included)
(1942 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 141 5e-33
BF01031B2E06 111 4e-24
BF01043B1E03 98 6e-20
BF14_335_C4 86 2e-16
BF01016B1E06 84 1e-15
BF14_335_C5 78 6e-14
BF01021A2B11 68 6e-11
BF01047B2H03 68 6e-11
>BF14_335_C2
Length = 1827
Score = 141 bits (71), Expect = 5e-33
Identities = 220/269 (81%), Gaps = 18/269 (6%)
Strand = Plus / Plus
Query: 15 aacgctcacctccacggtccaagctcctctctctacccaaccaaatttgaatcgaaccta 74
||||||||||||||| |||||||||||||||| || ||||||||||||| ||||||||
Sbjct: 947 aacgctcacctccaccgtccaagctcctctct---cctaaccaaatttgaaacgaaccta 1003
Query: 75 ctagtgctgccttc--------ctccaagaacgaattgatgtgagttctggacaggctca 126
|||| |||| |||| || ||||| ||| || ||| |||||||||||||| ||
Sbjct: 1004 ctagagctgtcttcgaagtacgttcgaagaatgaactggtgttagttctggacaggccca 1063
Query: 127 agtcttttactaggttgtagagagatttggctgttttacctcgc------tctcccactt 180
||| ||||| |||| ||||||||||||| |||||| |||||| | ||||||||||
Sbjct: 1064 agtattttagtaggctgtagagagatttagctgttatacctctctcactttctcccactt 1123
Query: 181 ctaatgcgtacaaa-tttacaacgaatatattcttagtgagccggttatacttgttgacc 239
||| |||||||| |||| ||||| ||||| |||||||| | |||||||||||||
Sbjct: 1124 ctaccacgtacaaattttattacgaacctattcctagtgagctcataatacttgttgacc 1183
Query: 240 ttgatggcatggtctttggggatgttggt 268
||||||||||||| |||||||||||||||
Sbjct: 1184 ttgatggcatggtttttggggatgttggt 1212
>BF01031B2E06
Length = 707
Score = 111 bits (56), Expect = 4e-24
Identities = 141/168 (83%), Gaps = 1/168 (0%)
Strand = Plus / Minus
Query: 102 ttgatgtgagttctggacaggctcaagtcttttactaggttgtagagagatttggctgtt 161
||||||| || ||||||||||| |||| ||||| |||||||| ||||||||| ||| ||
Sbjct: 606 ttgatgttagatctggacaggcccaaggtttttagtaggttgtggagagatttagctttt 547
Query: 162 ttacctcgctctcccacttctaatgcgtacaaatttacaacgaatatattcttagtgagc 221
| | | | |||||||||||| |||||||||||| | ||||| ||||||||||||||
Sbjct: 546 acaacgctcgctcccacttctaccgcgtacaaatttgccacgaacctattcttagtgagc 487
Query: 222 cg-gttatacttgttgaccttgatggcatggtctttggggatgttggt 268
|| |||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 486 ttcgtaatacttattgatcttgatggcatggtctttggggatgttggt 439
>BF01043B1E03
Length = 830
Score = 97.6 bits (49), Expect = 6e-20
Identities = 150/182 (82%), Gaps = 5/182 (2%)
Strand = Plus / Minus
Query: 1 tctaacgcgcgtgaaacgctcacctccacggtccaagctcctctctctacccaaccaaat 60
|||||||||||| || |||||||||||| ||||||| ||||||||||||| ||||||||
Sbjct: 385 tctaacgcgcgttaagtgctcacctccactgtccaaggtcctctctctacctaaccaaat 326
Query: 61 ttgaatcgaacctactagtgc---tgccttcc--tccaagaacgaattgatgtgagttct 115
||||| | |||||| ||| ||| | | |||||||| || ||||||| ||||||
Sbjct: 325 ttgaaacaaacctaggcctgcctttgcagtacgttccaagaatgatttgatgttagttct 266
Query: 116 ggacaggctcaagtcttttactaggttgtagagagatttggctgttttacctcgctctcc 175
|| ||||||||||| ||| | |||||||||||||||| |||||| |||||||| ||||
Sbjct: 265 gggcaggctcaagtgtttcagtaggttgtagagagatgaagctgttatacctcgcactcc 206
Query: 176 ca 177
||
Sbjct: 205 ca 204
>BF14_335_C4
Length = 1491
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 5 acgcgcgtgaaacgctcacctccacggtccaagctcctctctctacccaaccaaatttga 64
|||||| | ||||||||||||| || |||||||||||||||||||| |||||||| |||
Sbjct: 1237 acgcgcattaaacgctcacctcaactttccaagctcctctctctacctaaccaaatatga 1178
Query: 65 atcgaacctactagtgctgcctt 87
||||| ||| |||| ||||||||
Sbjct: 1177 atcgatcctgctagggctgcctt 1155
>BF01016B1E06
Length = 606
Score = 83.8 bits (42), Expect = 1e-15
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 8 cgcgtgaaacgctcacctccacggtccaagctcctctctctacccaaccaaatttgaa 65
||||| |||||||||||||||| |||||| |||||||||||||| |||||||||||||
Sbjct: 265 cgcgttaaacgctcacctccaccgtccaatctcctctctctacctaaccaaatttgaa 322
>BF14_335_C5
Length = 1597
Score = 77.8 bits (39), Expect = 6e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 1 tctaacgcgcgtgaaacgctcacctccacggtccaagctcctctctctacc 51
|||||||||| | |||||||||||||||| |||||||||||||||||||||
Sbjct: 1489 tctaacgcgcattaaacgctcacctccaccgtccaagctcctctctctacc 1439
>BF01021A2B11
Length = 729
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1 tctaacgcgcgtgaaacgctcacctccacggtccaagctcctctct 46
|||||| ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 418 tctaacacgcgttaaacgctcacctccaccgtccaagctcctctct 373
>BF01047B2H03
Length = 758
Score = 67.9 bits (34), Expect = 6e-11
Identities = 77/90 (85%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 334 aatatgtctggtctgcaggccgactcacaagtatcctctgggattttgtattgtttcaca 393
||||||||||||||| | ||||| ||||| ||| ||| |||||||||||| ||| | ||
Sbjct: 24 aatatgtctggtctggaaaccgacacacaa-tatgctcggggattttgtatcgttcccca 82
Query: 394 tacgtatccatcattgtagtccaatccgaa 423
||||||||||| ||| |||| |||||||||
Sbjct: 83 tacgtatccatgattatagtgcaatccgaa 112
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 177,959
Number of extensions: 4174
Number of successful extensions: 4174
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 4169
Number of HSP's successfully gapped: 11
Length of query: 1942
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1925
Effective length of database: 8,119,229
Effective search space: 15629515825
Effective search space used: 15629515825
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)