BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14068 (UTR included)
(5212 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A1F10 1449 0.0
>BF01041A1F10
Length = 757
Score = 1449 bits (731), Expect = 0.0
Identities = 750/757 (99%)
Strand = Plus / Plus
Query: 3478 gtgtgaatacggaagggggctatcgttgtgaatgtcttccaaattggagactagatacct 3537
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtgaatacggaggggggctatcgttgtgaatgtcttccaaattggagactagatacct 60
Query: 3538 acagacataaatgtgtccctgtttggaataaaggacagtttccgccagggtacggaaata 3597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acagacataaatgtgtccctgtttggaataaaggacagtttccgccagggtacggaaata 120
Query: 3598 taccagttaacaaccctttaaataaaaataagcaaccgtcaagttccgaagaggagaaga 3657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taccagttaacaaccctttaaataaaaataagcaaccgtcaagttccgaagaggagaaga 180
Query: 3658 aacttagtgagcctgatgtcatacaggtcgaagacaagggaacagtgtcgatctgtccct 3717
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacttagtgagcctgatatcatacaggtcgaagacaagggaacagtgtcgatctgtccct 240
Query: 3718 ctggaacaagattaaatgaatttaatatttgtgaagatgtagatgaatgtgtcaccgggg 3777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggaacaagattaaatgaatttaatatttgtgaagatgtagatgaatgtgtcaccgggg 300
Query: 3778 aagctcagtgtggtccattacaaatctgcaggaacttgtatcgtggctactcctgctcgt 3837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagctcagtgtggtccattacaaatctgcaggaacttgtatcgtggctactcctgctcgt 360
Query: 3838 gtccaccaggatacaggctcgtcggtgatcatcagtgcgaggacgtcgacgaatgtgctg 3897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtccaccaggatacaggctcgtcggtgatcatcagtgcgaggacgtcgacgaatgtgctg 420
Query: 3898 cttctggggatgtgcccatctgctcgcaaaacgctgattgtataaatacaatggggtcat 3957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttctggggatgtgcccatctgctcgcaaaacgctgattgtataaatacaatggggtcat 480
Query: 3958 acatgtgtcgttgtcatactggatttaggtcagcacctgtcaacgaaaaggtgtgcgtag 4017
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 481 acatgtgtcgttgtcatactggatttagatcagcacctgtcaacgaaaaggtgtgcgtag 540
Query: 4018 atgtggatgaatgttcggagtcccgagctgggtatctctgccagcagcattgtgcaaacg 4077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgtggatgaatgttcggagtcccgagctgggtatctctgccagcagcattgtgcaaacg 600
Query: 4078 tatggggaggttacagatgttcttgttacagaggttacagattaaatccggataaccgga 4137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tatggggaggttacagatgttcttgttacagaggttacagattaaatccggataaccgga 660
Query: 4138 cttgttcggatgtagacgagtgcagcgagttcaaagatcgcctttgtttgggaacatgtt 4197
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttgttcggatgtagacgnntgcagcgagttcaaagatcgcctttgtttgggaacatgtt 720
Query: 4198 tgaatgaaccgggcagctacagatgtacttgtccgtc 4234
|||||||||| |||||||||||||| |||||||||||
Sbjct: 721 tgaatgaaccaggcagctacagatgcacttgtccgtc 757
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 527,100
Number of extensions: 9719
Number of successful extensions: 9719
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9717
Number of HSP's successfully gapped: 1
Length of query: 5212
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5194
Effective length of database: 8,109,745
Effective search space: 42122015530
Effective search space used: 42122015530
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)