BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14072 (UTR included)
(1252 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 194 2e-49
BF01060B1D11 141 3e-33
BF01047B2H03 135 2e-31
BF01031B2E06 127 5e-29
BF01043B1E03 86 2e-16
>BF14_335_C2
Length = 1827
Score = 194 bits (98), Expect = 2e-49
Identities = 236/281 (83%), Gaps = 7/281 (2%)
Strand = Plus / Minus
Query: 978 acatatttatgtattcgcgaattttaaatcgcgttgtgatgatagagcttacgcttcctt 1037
|||||||| ||||||||||||||||||| |||| | | | ||||||| |||| ||||||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 1038 gggaaaccaacatccccaaagaccataccatcaaggtcaaccaatattacgagctcactc 1097
|| | ||||||||||||||| ||||| |||||||||||||| | ||||| |||||||||
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcacta 1158
Query: 1098 gaaataggttcgtcgt-ggatttatacgcggtagaagtggga------gcgagaggtata 1150
| ||||||||||| | |||| |||| ||||||||||||| | ||||||||||
Sbjct: 1157 ggaataggttcgtaataaaatttgtacgtggtagaagtgggagaaagtgagagaggtata 1098
Query: 1151 acggctaaatttctctacaaactactaaaagacttgggcctgtccagaactcacatcaat 1210
|| ||||||| |||||||| ||||||||| |||||||||||||||||||| ||| || |
Sbjct: 1097 acagctaaatctctctacagcctactaaaatacttgggcctgtccagaactaacaccagt 1038
Query: 1211 tcattcttggaacgttcttcgaaggcagacctagtaggttc 1251
|||||||| |||||| |||||||| ||| |||||||||||
Sbjct: 1037 tcattcttcgaacgtacttcgaagacagctctagtaggttc 997
>BF01060B1D11
Length = 799
Score = 141 bits (71), Expect = 3e-33
Identities = 202/243 (83%), Gaps = 7/243 (2%)
Strand = Plus / Minus
Query: 605 ggatcgcaatagttttgggatgactttaaaaaggtcatcggagctctataaacacctgag 664
||||||||||||||||||||||| | |||||||| |||||||||||||||||||| | ||
Sbjct: 605 ggatcgcaatagttttgggatgagtctaaaaaggccatcggagctctataaacacttaag 546
Query: 665 agtttccaagagatacatcctggggaaatcccaggatgacgtcgttacatcgctcccaaa 724
||||||||||||| | |||| ||||||| |||| |||| ||| ||||||| ||||||||
Sbjct: 545 agtttccaagagacatatcccggggaaagcccataatgatgtcattacatcactcccaaa 486
Query: 725 agacaaagaggccccgccccagagctagagtc-aaggcttcaattccacaagcagtttat 783
| | ||| | |||||| ||| |||| || |||||||||||||| ||||||||
Sbjct: 485 aaccggaga-----tggcccagaactaaagtctgagacttcaattccacaaacagtttat 431
Query: 784 gataggagcgcaaagtaac-atagtagagctaggatcaagtaagaaggtccaagatacgg 842
||||||||| ||||||||| | ||||| |||||||||| ||||||| ||||||| ||
Sbjct: 430 gataggagcacaaagtaacgagagtaggattaggatcaaggaagaaggctcaagatatgg 371
Query: 843 ata 845
|||
Sbjct: 370 ata 368
>BF01047B2H03
Length = 758
Score = 135 bits (68), Expect = 2e-31
Identities = 180/216 (83%), Gaps = 6/216 (2%)
Strand = Plus / Minus
Query: 631 taaaaaggtcatcggagctctataaacacctgagagtttccaagagatacatcctgggga 690
|||||||| |||||||||||||||||||| | ||||||||||||||| | |||| |||||
Sbjct: 750 taaaaaggccatcggagctctataaacacttaagagtttccaagagacatatcccgggga 691
Query: 691 aatcccaggatgacgtcgttacatcgctcccaaaagacaaagaggccccgccccagagct 750
|| |||| |||| ||| ||||||| ||| ||||| | | ||| ||||| || ||
Sbjct: 690 aagcccataatgatgtcattacatcactctcaaaaaatagagatgcccct-----gaact 636
Query: 751 agagtcaaggcttcaattccacaagcagtttatgataggagcgcaaagtaac-atagtag 809
| ||||||| ||||||||||| || ||||||||||||||||| ||||||||| | |||||
Sbjct: 635 aaagtcaagacttcaattccataaacagtttatgataggagcacaaagtaacgagagtag 576
Query: 810 agctaggatcaagtaagaaggtccaagatacggata 845
|||||||||| ||||||| ||||||||||||||
Sbjct: 575 gattaggatcaaggaagaaggcccaagatacggata 540
>BF01031B2E06
Length = 707
Score = 127 bits (64), Expect = 5e-29
Identities = 167/200 (83%), Gaps = 1/200 (0%)
Strand = Plus / Plus
Query: 1040 gaaaccaacatccccaaagaccataccatcaaggtcaaccaatattacga-gctcactcg 1098
|||||||||||||||||||||||| |||||||| |||| | |||||||| |||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
Query: 1099 aaataggttcgtcgtggatttatacgcggtagaagtgggagcgagaggtataacggctaa 1158
||||||||||| | |||| ||||||||||||||||||||||| | | ||| |||||
Sbjct: 496 gaataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgtaaaagctaa 555
Query: 1159 atttctctacaaactactaaaagacttgggcctgtccagaactcacatcaattcattctt 1218
|| |||| |||| ||||||||| |||||||||||||||| || ||||||| | || ||
Sbjct: 556 atctctccacaacctactaaaaaccttgggcctgtccagatctaacatcaaataatcttt 615
Query: 1219 ggaacgttcttcgaaggcag 1238
|||| | ||||||||||||
Sbjct: 616 agaacatacttcgaaggcag 635
>BF01043B1E03
Length = 830
Score = 85.7 bits (43), Expect = 2e-16
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 1134 tgggagcgagaggtataacggctaaatttctctacaaactactaaaagacttgggcctgt 1193
|||||| | |||||||||| ||| || ||||||||| ||||| ||| ||||| |||||
Sbjct: 204 tgggagtgcgaggtataacagcttcatctctctacaacctactgaaacacttgagcctgc 263
Query: 1194 ccagaactcacatcaattcattcttggaacgttcttcgaaggcagacctag 1244
|||||||| ||||||| ||||||||||||||| || | ||||||| |||||
Sbjct: 264 ccagaactaacatcaaatcattcttggaacgtactgcaaaggcaggcctag 314
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 134,515
Number of extensions: 2651
Number of successful extensions: 2651
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2648
Number of HSP's successfully gapped: 8
Length of query: 1252
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1235
Effective length of database: 8,119,229
Effective search space: 10027247815
Effective search space used: 10027247815
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)