BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14101 (UTR included)
(1747 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C4 84 9e-16
BF14_335_C2 84 9e-16
BF01049B1F01 80 1e-14
BF01019A1H08 76 2e-13
>BF14_335_C4
Length = 1491
Score = 83.8 bits (42), Expect = 9e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 315 ccttaaacctacacctgggttgcaagtctcaggcactgttgaagctcctc 364
|||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 1250 ccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctc 1299
>BF14_335_C2
Length = 1827
Score = 83.8 bits (42), Expect = 9e-16
Identities = 190/238 (79%), Gaps = 16/238 (6%)
Strand = Plus / Minus
Query: 132 ataacagccaaatctctatacaacctacttgaagacttgggcctgtcaagaactaacatc 191
|||||||| |||||||| |||| |||||| || ||||||||||||| |||||||||| |
Sbjct: 1100 ataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaactaacacc 1041
Query: 192 agttgattcttgaaacgtgcgtcgaaggcagagttagtgggttcttatccaatttgttta 251
|||| |||||| ||||| | |||||| ||| |||| ||||| | || |||||| |||
Sbjct: 1040 agttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaatttggtta 981
Query: 252 ggtagagagaggagtttggac---ggaggtgagcct--ttaacgcgggttagatagggcc 306
| |||||||||| |||||| |||||||||| | | ||||| ||||||||||| |
Sbjct: 980 g---gagagaggagcttggacggtggaggtgagcgttatgtacgcgagttagataggggc 924
Query: 307 taggggcaccttaaacctacacctgggttgcaagtctcaggcactgttgaagctcctc 364
| |||||||||||||||| || |||| || |||||||||||||||||||||
Sbjct: 923 t--------cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctc 874
>BF01049B1F01
Length = 840
Score = 79.8 bits (40), Expect = 1e-14
Identities = 99/119 (83%), Gaps = 11/119 (9%)
Strand = Plus / Minus
Query: 249 ttaggtagagagaggagtttggacgg---aggtgagcctttaacgcgggttagatagggc 305
||||||||||||||||| |||||||| ||||| | ||||||| | ||||||||||||
Sbjct: 708 ttaggtagagagaggagcttggacggtagaggtgggtgtttaacgggagttagatagggc 649
Query: 306 ctaggggcaccttaaacctacacctgggttgcaagtctcaggcactgttgaagctcctc 364
| ||||| |||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 648 c--------ccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctc 598
>BF01019A1H08
Length = 504
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 315 ccttaaacctacacctgggttgcaagtctcaggcactgttgaagctcctc 364
|||||||||||||||||||| |||| || |||||||||||||||||||||
Sbjct: 479 ccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctc 430
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 208,465
Number of extensions: 11022
Number of successful extensions: 11022
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 11022
Number of HSP's successfully gapped: 4
Length of query: 1747
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1730
Effective length of database: 8,119,229
Effective search space: 14046266170
Effective search space used: 14046266170
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)