BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14103 (UTR included)
(3844 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3302_C1 2575 0.0
BF14_3302_C2 389 e-107
>BF14_3302_C1
Length = 1414
Score = 2575 bits (1299), Expect = 0.0
Identities = 1359/1379 (98%)
Strand = Plus / Plus
Query: 1725 gacagatactacacagccttgtaccggaaactgacaaattccaatatattcaatactacc 1784
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3 gacacatactacacagccttgtaccggaaactgaccaattccaatatattcaatactacc 62
Query: 1785 cactctgcattgttcttctctctcatatacaagtcgttgaagcaggacaaggatatagac 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cactctgcattgttcttctctctcatatacaagtcgttgaagcaggacaaggatatagac 122
Query: 1845 cgggtgacgtcattcatcaagagattattacagctgtcctgctacatgagccctggccag 1904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 cgggtgacgtcattcatcaagagattattacagctgtcctgctacatgagccctggccag 182
Query: 1905 gcttgcggaatgctcttcctcatctcgcaagtattgaagagtgatgataagagagaggct 1964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcttgcggaatgctcttcctcatctcgcaagtattgaagagtgatgataagagagaggct 242
Query: 1965 gtaaaactggtcttcagtgagattaaagaggaaattaaagaagaaaatgaaactaaaaat 2024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gtaaaactggtcttcagtgagattaaagaggaaattaaagaagaaaatgaaactaaaaat 302
Query: 2025 aatgatgaaaatccagaagaattaatgcattcagaagttgaattagatgagagtaaggaa 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aatgatgaaaatccagaagaattaatgcattcagaagttgaattagatgagagtaaggaa 362
Query: 2085 gatgctgaggaaaatgtcaaacagaaaaaaattgatctcttaataggagataagaaagat 2144
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gatgccgaggaaaatgtcaaacagaaaaaaattgatctcttaataggagataagaaagat 422
Query: 2145 ttattaatggatgatgaagaagagacatatgttgacctcaaaatagacgatgaaggtaac 2204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttattaatggatgatgaagaagagacatatgttgacctcaaaatagacgatgaaggtaac 482
Query: 2205 ataaagcctaagaagaggaatacgaactctgtgactgggtggtttcatgctagagttgac 2264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ataaagcctaagaagaggaatacgaactctgtgactgggtggtttcatgctagagttgac 542
Query: 2265 aagaaagatgtacaagaaaaaaacgttgagaaacagttgaagaaagctattaatattgga 2324
|||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aagaaagacgtccaagaaaaagacgttgagaaacagttgaagaaagctattaatattgga 602
Query: 2325 aagacgataaccagttatagtccactgtgccgtgaccctcgtttcaccggagcacacctg 2384
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 aagacgataaccagttataatccactgtgccgtgaccctcgtttcaccggagcacacctg 662
Query: 2385 acggcgatggctgaactgacaatgctgatgaaacatcatcatccgagtgtcaagatgttt 2444
||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 663 acggcgacggctgaactgacaatgctgataaaacatcatcatcccagtgtcaagatgttt 722
Query: 2445 gctgaaaaattactgaataatcaaataatccaatatggcggcgatcctttgaaggacttt 2504
||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 723 gctgaaaaattactgaataatcaaataatccaatacggcggtgaccctttgaaggacttt 782
Query: 2505 tccggtatccgtttcctggatagattcgtgttcaagaatccaaagaaacgtgccgaggtc 2564
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 tccggcatccgtttcctggatagattcgtgttcaagaatccaaagaaacgtgccgaggtc 842
Query: 2565 actgatggggaggtcaaaaaggttaaggggtcacatccgaagttcgctgttagaaagaac 2624
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 actgatggggaggtcaaaaaggttaaggggtcacatccgaagttcgctgttagaaagaat 902
Query: 2625 tatacagctaaaggcatcagaagtatcgctgtcaattcatcggcatatttgaatgaggat 2684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 tatacagctaaaggcatcagaagtatcgctgtcaattcatcggcatatttgaatgaggat 962
Query: 2685 gtcaagaaaattcctgtcgatgaaagattcctatatgatttccttcaaaagcgccgagcg 2744
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 963 gtcaagaaaattcctgtcgatgaaagattcctatatgatttccttcaaaagcgtcgagcg 1022
Query: 2745 gctgctgatagtgatgaggagagtgacaacgactcggtgaccagcgaagattttgagacc 2804
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 gctgctgatagtgatgaggagagtgacaacgactcggtgaccagcgaagattttgagact 1082
Query: 2805 tatttggattcagtcactggaaccaaagcacaggaatccgatgaggagttagattatttg 2864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 tatttggattcagtcactggaaccaaagcacaggaatccgatgaggagttagattatttg 1142
Query: 2865 ggtgaattggagtcgagtaaacagaaacgaccgaaggaagttgatgatgagaaagatgag 2924
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1143 ggtgaattggagtcgagtaaacagaaacgaccgaagaaagttgatgatgagaaagatgat 1202
Query: 2925 gtgatgagcgatgatcaagatgaagacgatgatagcgatggcgaactcaatatatccggt 2984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 gtgatgagcgatgatcaagatgaagacgatgatagcgatggcgaactcaatatatccggt 1262
Query: 2985 gatgaagacgagccagtactatccggagacgaggacgaactaatgttagaagacagcgaa 3044
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 gatgaagatgagccagtactatccggagacgaggacgaactaatgttagaagacagcgaa 1322
Query: 3045 gaagaagaccagatagatataccaggaaagaagtccaaaaaggatgctattaaattaaa 3103
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 gaagaagaccagatagatataccaggaaagaagtccaaaaaggatgctattaaattaaa 1381
>BF14_3302_C2
Length = 1419
Score = 389 bits (196), Expect = e-107
Identities = 208/212 (98%)
Strand = Plus / Minus
Query: 1784 ccactctgcattgttcttctctctcatatacaagtcgttgaagcaggacaaggatataga 1843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 ccactctgcattgttcttctctctcatatacaagtcgttgaagcaggacaaggatataga 1300
Query: 1844 ccgggtgacgtcattcatcaagagattattacagctgtcctgctacatgagccctggcca 1903
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 ccgggtgacgtcattcattaagagattattacagctgtcctgctacatgagccctggcca 1240
Query: 1904 ggcttgcggaatgctcttcctcatctcgcaagtattgaagagtgatgataagagagaggc 1963
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 ggcttgcgaaatgctcttcctcatctcgcaagtattgaagagtgatgataagagagaggc 1180
Query: 1964 tgtaaaactggtcttcagtgagattaaagagg 1995
||||||||||||||| | ||||||||||||||
Sbjct: 1179 tgtaaaactggtctttactgagattaaagagg 1148
Score = 321 bits (162), Expect = 5e-87
Identities = 171/174 (98%)
Strand = Plus / Minus
Query: 2154 gatgatgaagaagagacatatgttgacctcaaaatagacgatgaaggtaacataaagcct 2213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gatgatgaagaagagacatatgttgacctcaaaatagacgatgaaggtaacataaagcct 367
Query: 2214 aagaagaggaatacgaactctgtgactgggtggtttcatgctagagttgacaagaaagat 2273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aagaagaggaatacgaactctgtgactgggtggtttcatgctagagttgacaagaaagat 307
Query: 2274 gtacaagaaaaaaacgttgagaaacagttgaagaaagctattaatattggaaag 2327
|| ||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 306 gtccaagaaaaagacgttgagaaacagttgaagaaagctattaatatcggaaag 253
Score = 309 bits (156), Expect = 2e-83
Identities = 159/160 (99%)
Strand = Plus / Minus
Query: 1993 aggaaattaaagaagaaaatgaaactaaaaataatgatgaaaatccagaagaattaatgc 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 aggaaattaaagaagaaaatgaaactaaaaataatgatgaaaatccagaagaattaatgc 691
Query: 2053 attcagaagttgaattagatgagagtaaggaagatgctgaggaaaatgtcaaacagaaaa 2112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 attcagaagttgaattagatgagagtaaggaagatgctgaggaaaatgtcaaacagaaaa 631
Query: 2113 aaattgatctcttaataggagataagaaagatttattaat 2152
|||||||||||||||||||||||||||||||| |||||||
Sbjct: 630 aaattgatctcttaataggagataagaaagatctattaat 591
Score = 111 bits (56), Expect = 8e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 1586 tgctgacagggagcggttggttgaggcctcccagcatgtagacgctgtacaccgactggt 1645
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 1419 tgctgacagggagcggttggttgaggcctcccagcatgtagacgctgtgcacagactggt 1360
Query: 1646 ccac 1649
||||
Sbjct: 1359 ccac 1356
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 398,149
Number of extensions: 7101
Number of successful extensions: 7101
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7101
Number of HSP's successfully gapped: 5
Length of query: 3844
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3826
Effective length of database: 8,109,745
Effective search space: 31027884370
Effective search space used: 31027884370
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)