BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14104 (UTR included)
(4729 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005A1H04 1435 0.0
BF01044B2F07 519 e-146
>BF01005A1H04
Length = 749
Score = 1435 bits (724), Expect = 0.0
Identities = 742/748 (99%)
Strand = Plus / Plus
Query: 1738 agcaggagatcaccaagagaattgtgagatgcagttaccccgtgcccaacgacgtcagcc 1797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcaggagatcaccaagagaattgtgagatgcagttaccccgtgcccaacgacgtcagcc 60
Query: 1798 ccgctgttcaggacttcatcaagaaacttttagtaaaggaccctcgtcgtcgtctaggag 1857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgctgttcaggacttcatcaagaaacttttagtaaaggaccctcgtcgtcgtctaggag 120
Query: 1858 gcggtgatgatgatgcagaggaattgaaacgacaccccttcttccaggacctggactggg 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcggtgatgatgatgcagaggaattgaaacgacaccccttcttccaggacctggactggg 180
Query: 1918 aggcggtgtcccggcgcgaggtggccgccccgttcgtgccgcagctgtcgcacgcagctg 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggcggtgtcccggcgcgaggtggccgccccgttcgtgccgcagctgtcgcacgcagctg 240
Query: 1978 acacgtgtaacttcgccgacgagttcaccaggatgccgcccaccgactcgccggcacagg 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acacgtgtaacttcgccgacgagttcaccaggatgccgcccaccgactcgccggcacagg 300
Query: 2038 cgcccaaacaccacgacaaactgttcctaggttactcatatgtggcacccagcatcctgt 2097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgcccaaacaccacgacaaactgttcctaggttactcatatgtggcacccagcatcctgt 360
Query: 2098 tctctgagaacatcatctcggatcagatctggcttcaggcgaccggacagaagcacgaga 2157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctctgagaacatcatctcggatcagatctggcttcaggcgaccggacagaagcacgaga 420
Query: 2158 agctcaagggatggatcgctaaggactcgccgttcttccagaagtattctgttgacttga 2217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agctcaagggatggatcgctaaggactcgccgttcttccagaagtattctgttgacttga 480
Query: 2218 gcactcctctgctgggtgacggctcatatgctgtttgtaggaagtgtatacacagacaga 2277
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 481 gcactcctctgcttggtgacggctcatatgctgtttgtaggaagtgtatacacagacaaa 540
Query: 2278 cgggcaaggaatatgctgttaagataatatcgtcacagaagaaggacgtgaagcaagaga 2337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgggcaaggaatatgctgttaagataatatcgtcacagaagaaggacgtgaagcaagaga 600
Query: 2338 tagacctgctgaagacctgtcagggctgtccttacatcatacagctgcatgaggtgttcc 2397
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 601 tagacctgttgaagacctgtcagggctgtccttacatcatacagctgcacgaggtgttcc 660
Query: 2398 acgacactgcgttcacctacatagtgacggagctggcgatgggcggtgagctatcctcgg 2457
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 661 acgacactgcgttcacgtacatcgtgacggagctggcgatgggcggtgagctatcctcgg 720
Query: 2458 tgctgggcgcggtcagcgagcgggtggc 2485
||||||||||||||||||||||||||||
Sbjct: 721 tgctgggcgcggtcagcgagcgggtggc 748
>BF01044B2F07
Length = 719
Score = 519 bits (262), Expect = e-146
Identities = 262/262 (100%)
Strand = Plus / Plus
Query: 1126 cgtacggtaaagtgttcttagtaaggaagagatgtggtgtggacgagggtaagctatacg 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cgtacggtaaagtgttcttagtaaggaagagatgtggtgtggacgagggtaagctatacg 517
Query: 1186 ctatgaaggtgctgaagaaggccagcatagtgcagaaactcaagacggcggagcacacca 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ctatgaaggtgctgaagaaggccagcatagtgcagaaactcaagacggcggagcacacca 577
Query: 1246 ggacggagagacaggtcttggaggctgtgagggcctgtcccttcctggtgaccctacatt 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ggacggagagacaggtcttggaggctgtgagggcctgtcccttcctggtgaccctacatt 637
Query: 1306 acgccttccagacagatgccaagctacatctcatactcgactacgtggccggcggggagc 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 acgccttccagacagatgccaagctacatctcatactcgactacgtggccggcggggagc 697
Query: 1366 tgttcacacacctgtaccagcg 1387
||||||||||||||||||||||
Sbjct: 698 tgttcacacacctgtaccagcg 719
Score = 139 bits (70), Expect = 5e-32
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 915 gttaatttgaacagtgcatccaaagtggacatatcacattttgacttgctcaaagtttta 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gttaatttgaacagtgcatccaaagtggacatatcacattttgacttgctcaaagtttta 447
Query: 975 ggcactggcg 984
||||||||||
Sbjct: 448 ggcactggcg 457
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 377,391
Number of extensions: 6323
Number of successful extensions: 6323
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6323
Number of HSP's successfully gapped: 3
Length of query: 4729
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4711
Effective length of database: 8,109,745
Effective search space: 38205008695
Effective search space used: 38205008695
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)