BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14111 (UTR included)
(1366 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_564_C1 809 0.0
BF01050B1A05 143 8e-34
>BF14_564_C1
Length = 1284
Score = 809 bits (408), Expect = 0.0
Identities = 411/412 (99%)
Strand = Plus / Minus
Query: 955 ttctggaatcaatgtataacatttatttaactaaaaaataagttactagtagtgattctt 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 ttctggaatcaatgtataacatttatttaactaaaaaataagttactagtagtgattctt 1200
Query: 1015 ccaatctaatacatgatttcaggggagcggttgctagatgtgatttaaaatcacatagaa 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 ccaatctaatacatgatttcaggggagcggttgctagatgtgatttaaaatcacatagaa 1140
Query: 1075 tatttatggtaacagttcttatgttagaattagagcagtttcttgatttcgtcgtagagg 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 tatttatggtaacagttcttatgttagaattagagcagtttcttgatttcgtcgtagagg 1080
Query: 1135 acgagcacgaaagcaccacctgtacctctgaggacgttggagaaggctcccttgaagaag 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 acgagcacgaaagcaccacctgtacctctgaggacgttggagaaggctcccttgaagaag 1020
Query: 1195 gcggatgcaccctcggacttggcgatagtggcccagcagtggatcgtgttcttgtagagc 1254
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 gcggacgcaccctcggacttggcgatagtggcccagcagtggatcgtgttcttgtagagc 960
Query: 1255 acctcggacttagcgcgtccggactgcatcatcatgcgcctacggaccgtgtcgaatgga 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 acctcggacttagcgcgtccggactgcatcatcatgcgcctacggaccgtgtcgaatgga 900
Query: 1315 taggagatgataccggcgactgtggtgacggtctgagcgatcgcccagctga 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 taggagatgataccggcgactgtggtgacggtctgagcgatcgcccagctga 848
>BF01050B1A05
Length = 217
Score = 143 bits (72), Expect = 8e-34
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 734 gtgtaaactcagctgttacctacaaagttacactaaccacaattacataacatcacatga 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gtgtaaactcagctgttacctacaaagttacactaaccacaattacataacatcacatga 60
Query: 794 ttacataaccca 805
||||||||||||
Sbjct: 59 ttacataaccca 48
Score = 71.9 bits (36), Expect = 3e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 781 taacatcacatgattacataacccatctaggttggg 816
||||||||||||||||||||||||||||||||||||
Sbjct: 16 taacatcacatgattacataacccatctaggttggg 51
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 167,070
Number of extensions: 3670
Number of successful extensions: 3670
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3670
Number of HSP's successfully gapped: 3
Length of query: 1366
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1349
Effective length of database: 8,119,229
Effective search space: 10952839921
Effective search space used: 10952839921
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)