BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14150 (UTR included)
(2296 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A2D06 807 0.0
>BF01030A2D06
Length = 687
Score = 807 bits (407), Expect = 0.0
Identities = 407/407 (100%)
Strand = Plus / Plus
Query: 358 ttcatgtttattatttatttacttctaacatctgtataaacagagtaccatgtataatac 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcatgtttattatttatttacttctaacatctgtataaacagagtaccatgtataatac 60
Query: 418 gaaatataaaataaatcaaaagatttctattttaatctcatatttaggtgaaaagtttta 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaatataaaataaatcaaaagatttctattttaatctcatatttaggtgaaaagtttta 120
Query: 478 tttaaaaatatttctagataaaaatgactacaaattcacttatccaattgccgttggagg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttaaaaatatttctagataaaaatgactacaaattcacttatccaattgccgttggagg 180
Query: 538 ttttagcgaacatagtgatacatttagaattaaatgatattcgtaacctaatgctaacat 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttagcgaacatagtgatacatttagaattaaatgatattcgtaacctaatgctaacat 240
Query: 598 gtaagacttttcacggcttaatagttaatgaaaatatattcatgagactaatatttcgca 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtaagacttttcacggcttaatagttaatgaaaatatattcatgagactaatatttcgca 300
Query: 658 acaaattggttttacagaataggggcaggcaacacaattcgtattcttggtataatagat 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaaattggttttacagaataggggcaggcaacacaattcgtattcttggtataatagat 360
Query: 718 gtagaataagtcacaattggcaaaaaggaatatatagaaataaggta 764
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtagaataagtcacaattggcaaaaaggaatatatagaaataaggta 407
Score = 436 bits (220), Expect = e-122
Identities = 220/220 (100%)
Strand = Plus / Plus
Query: 760 aggtacttgtccaacacaatacaaattatatgccatggttgcaatttttacattctgata 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aggtacttgtccaacacaatacaaattatatgccatggttgcaatttttacattctgata 527
Query: 820 cattatacctctcggtgggttcggaattaaaatgctatagtctcaccaggaaaggcttaa 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 cattatacctctcggtgggttcggaattaaaatgctatagtctcaccaggaaaggcttaa 587
Query: 880 ttccttgtaattttttgtggtcaataactgttccgacagttagaaggaatgatatacgaa 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ttccttgtaattttttgtggtcaataactgttccgacagttagaaggaatgatatacgaa 647
Query: 940 caaatgacatatcaagatttgttgttagagatggtgtcat 979
||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 caaatgacatatcaagatttgttgttagagatggtgtcat 687
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,865
Number of extensions: 7515
Number of successful extensions: 7515
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7515
Number of HSP's successfully gapped: 2
Length of query: 2296
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2279
Effective length of database: 8,119,229
Effective search space: 18503722891
Effective search space used: 18503722891
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)