BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14156 (UTR included)
(1186 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2458_C1 1358 0.0
>BF14_2458_C1
Length = 931
Score = 1358 bits (685), Expect = 0.0
Identities = 703/709 (99%)
Strand = Plus / Plus
Query: 1 atatgagaaggtgcttgaaagccgaacgtatacgacgccaacaagcaaataatgatgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atatgagaaggtgcttgaaagccgaacgtatacgacgccaacaagcaaataatgatgaag 252
Query: 61 cagtgaggaaacatgctgaaagaaaagccagaatattagcacaatcacagaatactgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 253 cagtgaggaaacatgctgaaagaaaagccagaatattagcacaatcacagaatacggaaa 312
Query: 121 acttatagactacatattatattataataatggagtacaacatacttaaatcgatagacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 acttatagactacatattatattataataatggagtacaacatacttaaatcgatagacc 372
Query: 181 tcaatgaaaaatctatttacaaatcctttacagagagatacttcagtaaaagatatatac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 373 tcaatgaaaaatctatttacaaatcctttacagagagatacttcagtaaaagatatgtac 432
Query: 241 ttgatgtgaatggtattaaaaacaatgatattatgttgttgttccattcaaacagaataa 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttgatgtgaatggtattaagaacaatgatattatgttgttgttccattcaaacagaataa 492
Query: 301 cattactatgccttgccccaagtcacttcttttttaaacgagatgatgactacaaattga 360
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 493 cattactatgcctagccccaagtcatttcttttttaaacgagatgatgactacaaattga 552
Query: 361 actttactatcggtaaagtagatagattatctaacactgtcaaaggcaaaggcaagaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 actttactatcggtaaagtagatagattatctaacactgtcaaaggcaaaggcaagaaag 612
Query: 421 gaggtcaaatgttgaccccacatacagccatctgtaaagttgaatggagtgataatacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gaggtcaaatgttgaccccacatacagccatctgtaaagttgaatggagtgataatacaa 672
Query: 481 gttttgaaatacctgccggaatgaagggtttccttgttgaaatcaatgagcaactggtga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gttttgaaatacctgccggaatgaagggtttccttgttgaaatcaatgagcaactggtga 732
Query: 541 agaatcccaaactattaaaagaatgccctaattctgatggatttatagcaattatgctat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 agaatcccaaactattaaaagaatgccctaattctgatggatttatagcaattatgctat 792
Query: 601 cgagtatctcaatttctgactcattgaaaaaggaactcctcaaccacgaagagtatttaa 660
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 cgagtatctcaatttccgactcattgaaaaaggaactcctcaaccacgaagagtatttaa 852
Query: 661 aaattataaacagtagttgtgaataggaaataaataatttagttttgta 709
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 aaattataaacagtagttgtgaataggaaataaataatttagttttgta 901
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 176,472
Number of extensions: 4343
Number of successful extensions: 4343
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4343
Number of HSP's successfully gapped: 1
Length of query: 1186
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1169
Effective length of database: 8,119,229
Effective search space: 9491378701
Effective search space used: 9491378701
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)