BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14162 (UTR included)
(2062 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B1A06 1255 0.0
>BF01056B1A06
Length = 660
Score = 1255 bits (633), Expect = 0.0
Identities = 645/650 (99%)
Strand = Plus / Plus
Query: 237 agggaattgataagtaatttaagtaatttgtaagggattgtgcctagtttatttcaaatt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 agggaattgataagtaatttaagtaatttgtaagggattgtgcctagtttatttcaaatt 70
Query: 297 gtgatatttacctatttaatatcctactagctaacatagtttagtatttgtaagtaaatc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gtgatatttacctatttaatatcctactagctaacatagtttagtatttgtaagtaaatc 130
Query: 357 aaccagttacctgaagtagatatactcgttgaagttcgtctatgacggatcgatttggcg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aaccagttacctgaagtagatatactcgttgaagttcgtctatgacggatcgatttggcg 190
Query: 417 tacattgttaaaagttgcaggttatattctttttatattgtttttttgctagtgtttcaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tacattgttaaaagttgcaggttatattctttttatattgtttttttgctagtgtttcaa 250
Query: 477 agtagtaatacaaaaatggaaagtatggatgtcgcccaggaaagtacttcttcagcatct 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agtagtaatacaaaaatggaaagtatggatgtcgcccaggaaagtacttcttcagcatct 310
Query: 537 acgccagcaacagaaaatggacctgataaaaatgttactgctgaagagatgacctcgcgt 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 acgccagcaacagaaaatggacctgataaaaatgttactgctgaagagatgacctcgcgt 370
Query: 597 gattattattttgattcatacgcacatttcggtatacacgaggaaatgttaaaagatgaa 656
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 371 gattattattttgattcatacgcacatttcggtatacacgaggaaatgttaagagatgaa 430
Query: 657 gtccgtacacttacatatagaaatgctatgtatcacaataagcatctcttcaaaggaaaa 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gtccgtacacttacatatagaaatgctatgtatcacaataagcatctcttcaaaggaaaa 490
Query: 717 actgtgttagacataggctgcggtaccggaatattatccatgtttgcggctaaagcaggg 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 actgtgttagacataggctgcggtaccggaatattatccatgtttgcggctaaagcaggg 550
Query: 777 gcagctaaagttatagcagtggagtgctctaacatagttgactatgctcgtaagattgtt 836
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 551 gcagctaaagttatagcagtggagtgctctagcatagttgactatgctcgtnnnattgtt 610
Query: 837 gaggctaacagacttgatgatgttatagaaattgttaaaggaaaagttga 886
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gaggctaacagacttgatgatgttatagaaattgttaaaggaaaagttga 660
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 259,553
Number of extensions: 5692
Number of successful extensions: 5692
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5692
Number of HSP's successfully gapped: 1
Length of query: 2062
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2045
Effective length of database: 8,119,229
Effective search space: 16603823305
Effective search space used: 16603823305
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)