BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14166 (UTR included)
(6928 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1D12 1604 0.0
BF01043B2G07 1405 0.0
BF01010A2A01 729 0.0
>BF01056A1D12
Length = 841
Score = 1604 bits (809), Expect = 0.0
Identities = 833/841 (99%)
Strand = Plus / Plus
Query: 366 caatgttgttatatatgaaattctttggaaacaatttaaataaagtattctaagtgaaaa 425
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 caatgttgttatatatgaaattcttttgaaacaatttaaataaagtattctaagtgaaaa 60
Query: 426 ccaatgaagtcacttgaactagtacatcgccttggaagaattgagcaattcgtataaata 485
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgatgaagtcacttgaactagtacatcgccttggaagaattgagcaattcgtataaata 120
Query: 486 atggaacgcggtaaaatgtcgtcgaccggccgcggtggaaagagtaaagcacctcagcat 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggaacgcggtaaaatgtcgtcgaccggccgcggtggaaagagtaaagcacctcagcat 180
Query: 546 cctcaggatatatttgccttaggcagtaaatccacagtatcagtatccagggactctgaa 605
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 cctcaggatatatttgccttaggcagtaaatccactgtatcagtatccagggactctgaa 240
Query: 606 aaaagaaatatacacaaaccgtccacaagtagtgttggtgaaagaaagaggggagaatcc 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaagaaatatacacaaaccgtccacaagtagtgttggtgaaagaaagaggggagaatcc 300
Query: 666 tcaggttttggaggccaacctgcaagtaaacgggccagacttggttcccctgccgaagcc 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaggttttggaggccaacctgcaagtaaacgggccagacttggttcccctgccgaagcc 360
Query: 726 gtcactggcacctcattagaagttgaccctgtagatcttgtgccaaatgtgttacaagct 785
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcactggtacctcattagaagttgaccctgtagatcttgtgccaaatgtgttacaagct 420
Query: 786 cttgatacccataactctgataaattgctgggacttctaacaggatcaatacgtctctta 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttgatacccataactctgataaattgctgggacttctaacaggatcaatacgtctctta 480
Query: 846 aaatctcagaggtctaaaccagaccctatattatgtatgagtatgctctacttgacaaag 905
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 481 aaatctcagaggtctaaaccagaccctatattatgtatgagtatgctctacttgacgaag 540
Query: 906 atacgtccaaacatgtttgctcatgaaacagtaacacaatccctgtgcacattgctcaaa 965
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 541 atacgtccaaatatgtttgctcacgaaacagtaacacaatccctgtgcacattgctcaaa 600
Query: 966 agggaacaaggtgcagctttcaagagcaaagggaatcctttggtgtttgtactggcttgt 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agggaacaaggtgcagctttcaagagcaaagggaatcctttggtgtttgtactggcttgt 660
Query: 1026 aatatgctgtatgctggtcataaggatagtaataactggccagacacattcattaaggta 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aatatgctgtatgctggtcataaggatagtaataactggccagacacattcattaaggta 720
Query: 1086 tatatagaagatgctctgaatgaacgctggtgggtggattgctcctggtgcaaatgcttg 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tatatagaagatgctctgaatgaacgctggtgggtggattgctcctggtgcaaatgcttg 780
Query: 1146 gtggagaatatcctcacagcctttggcactaaacagcctcccgcacatcttataccaaca 1205
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 781 gtggagaatatcctcacagcctttggcactaaacaacctcccgcacatcttataccaaca 840
Query: 1206 g 1206
|
Sbjct: 841 g 841
>BF01043B2G07
Length = 736
Score = 1405 bits (709), Expect = 0.0
Identities = 728/736 (98%)
Strand = Plus / Plus
Query: 5277 gctcgtctgccgctgctgctgaggtgctgctccaccccgcaggcgctgctcgccgccgcc 5336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctcgtctgccgctgctgctgaggtgctgctccaccccgcaggcgctgctcgccgccgcc 60
Query: 5337 ctggccgcctccaacacacatcccttgctgctgttgctgttgtacatgaaggtccccaag 5396
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 ctggccgcctccaacacacatcccttgctgcttctgctgttgtacatgaaggtccccaag 120
Query: 5397 gtgttacacctgcttcgcacctgcggagaccgtcccgccgtgttggaggtgtctccggcg 5456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgttacacctgcttcgcacctgcggagaccgtcccgccgtgttggaggtgtctccggcg 180
Query: 5457 gcggtgagggcggcggcctggcgctccaccagcgccaccgacaaggtgtcccactgtctg 5516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcggtgagggcggcggcctggcgctccaccagcgccaccgacaaggtgtcccactgtctg 240
Query: 5517 ctcaccgccctggccgcgccgcatcaccactccaaggagaactcccagaagctggtgcgt 5576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcaccgccctggccgcgccgcatcaccactccaaggagaactcccagaagctggtgcgt 300
Query: 5577 gtggagagcgaggtgcgggcggtgtggtcgcgcgtgcagggcgccggccagcgcggcctg 5636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggagagcgaggtgcgggcggtgtggtcgcgcgtgcagggcgccggccagcgcggcctg 360
Query: 5637 tccctggcgggggccctgctgagaggggcggcgccgcacggacagagacacgctcacagc 5696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccctggcgggggccctgctgagaggggcggcgccgcacggacagagacacgctcacagc 420
Query: 5697 cacctgctggccgccatcgagatgctgccggatgaggagctgttcgcgacacacgtctgt 5756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cacctgctggccgccatcgagatgctgccggatgaggagctgttcgcgacacacgtctgt 480
Query: 5757 gacgaggtgcacggtatcctggagtgtttcctgggcacggtgaagcagggcagtggcgga 5816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gacgaggtgcacggtatcctggagtgtttcctgggcacggtgaagcagggcagtggcgga 540
Query: 5817 ggcagcctggctcaccgcgtggccgccctgctgagacgataccgcgccgcccgccccgcc 5876
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 541 ggcagcctggctcaccgcgtggccgccctgctgagacgataccgcgccgtccgccccgcc 600
Query: 5877 cgtgccgccgccctgctccacacacaccgggacatcatcgcctccaaccccgccctgagc 5936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgtgccgccgccctgctccacacacaccgggacatcatcgcctccaaccccgccctgagc 660
Query: 5937 ggcgcgtgcagcgccgagggtgccgcgtcctcgtctccgccgccgcgggcgctcctcgcc 5996
|| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggnncgtgcagcgccgnnngtgccgcgtcctcgtctccgccgccgcgggcgctcctcgcc 720
Query: 5997 ttgcagcgccgcaccg 6012
||||||||||||||||
Sbjct: 721 ttgcagcgccgcaccg 736
>BF01010A2A01
Length = 414
Score = 729 bits (368), Expect = 0.0
Identities = 383/388 (98%)
Strand = Plus / Plus
Query: 6214 ccggtctccaagctgttctggagtgcctggactcaagccagccggaaatagctcagtccg 6273
||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 1 ccggtctcctagctgttctggagtgtctggactcgagccagccggaaatagctcagtccg 60
Query: 6274 tgctggacaaactcccggagctagtggtgggtatgcaggaacacgcgtcaagactcctga 6333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctggacaaactcccggagctagtggtgggtatgcaggaacacgcgtcaagactcctga 120
Query: 6334 tgcgcgtgttcgagatgggcatgaaatctcggctgccggtggagcagtgtatcgccaagt 6393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcgcgtgttcgagatgggcatgaaatctcggctgccggtggagcagtgtatcgccaagt 180
Query: 6394 gcgtggccaccatcaacaccaaccggggctgctgagaacaacctccacccctagtcctgt 6453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcgtggccaccatcaacaccaaccggggctgctgagaacaacctccacccctagtcctgt 240
Query: 6454 tcaggaataggtatggtgccaagtaaacaaaacctaagcaaagacttgtaaagttaatgt 6513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 241 tcaggaataggtatggtgccaagtaaacaaaacctaagcaaagacttgtaaagttaacgt 300
Query: 6514 agaagtgaatatctgttacatgtgtattttatgaaaagcttttttttgtttagtaaaaca 6573
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 301 agaagtgaatatctgttacatgtgtattttatgaaaagattttttttgtttagtaaaaca 360
Query: 6574 aacaactgttaatatattttcaatatca 6601
||||||||||||||||||||||||||||
Sbjct: 361 aacaactgttaatatattttcaatatca 388
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 86,497
Number of extensions: 10615
Number of successful extensions: 10615
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 10608
Number of HSP's successfully gapped: 3
Length of query: 6928
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6910
Effective length of database: 8,109,745
Effective search space: 56038337950
Effective search space used: 56038337950
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)