BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14171 (UTR included)
(3142 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3017_C1 2383 0.0
>BF14_3017_C1
Length = 1244
Score = 2383 bits (1202), Expect = 0.0
Identities = 1233/1244 (99%)
Strand = Plus / Plus
Query: 1353 aatggttactataacgcacctttactcttgacaaatgatatagaagtgtccataggagtt 1412
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 aatggttactataacgcacctttactcttgacaaatgatatagaagtgtcgataggagtt 60
Query: 1413 gttagtaagaaaaattatgtgactaaagtaaggtatgccgagtcgactaagaaaattatt 1472
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 gttagtaagaaaaattatgtgactaaagtaaggtatgccgagtcaactaagaaaattatt 120
Query: 1473 ttaaacataaatgaacctgaggttgtgtcgccactggtggtagggcttggggctggtatt 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaaacataaatgaacctgaggttgtgtcgccactggtggtagggcttggggctggtatt 180
Query: 1533 gcaataggagtagtgctcctgctcatagggattggagccctgattgttctccgcaagaag 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcaataggagtagtgctcctgctcatagggattggagccctgattgttctccgcaagaag 240
Query: 1593 atccacattaataggatgcaaagaggctcacaatcaatgcctttgaatctcagtgaacca 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atccacattaataggatgcaaagaggctcacaatcaatgcctttgaatctcagtgaacca 300
Query: 1653 tgcttagaaattgaaaatgcaggattcttacaggatgaagatgagagagtggactattac 1712
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcttagaaattgaaaatgctggattcttacaggatgaagatgagagagtggactattac 360
Query: 1713 ggcaatttgaaacgtaagctatggaatataccgagaaacctcatagatatagacatctca 1772
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 361 ggcaatttgaaacgtaagctatggaatataccaagaaacctcatagatatagacatctca 420
Query: 1773 tgcgtagtgggtgtaggaagctatgggaaattcactaagggcaaggtacagcaacacggc 1832
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtgttgtgggtgtaggaagctatgggaaattcactaagggcaaggtacagcaacacggc 480
Query: 1833 gcacaaaccggtggtttggttcaagtgatcaatgataaagaactcgagaaagcagagagg 1892
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcacaaaccggtggtttggtccaagtgatcaatgataaagaactcgagaaagcagagagg 540
Query: 1893 agagtaatgcttcaagaactcgacttacttattaaatcttgtgaacatgaaaatattgta 1952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agagtaatgcttcaagaactcgacttacttattaaatcttgtgaacatgaaaatattgta 600
Query: 1953 tcacttattggcatctgtgagacgagcaccaccctacttgtggttctgcaggatacaaaa 2012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcacttattggcatctgtgagacgagcaccaccctacttgtggttctgcaggatacaaaa 660
Query: 2013 acatctcttaaggaaatgttgcttcaaagcaggcaaagggatctcaaaaataataaattc 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acatctcttaaggaaatgttgcttcaaagcaggcaaagggatctcaaaaataataaattc 720
Query: 2073 tgtctcataacagagaacaaggctctacaaatttgtatggatgttgcttgtggaatggaa 2132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgtctcataacagagaacaaggctctacaaatttgtatggatgttgcttgtggaatggaa 780
Query: 2133 tatttgcatagtaaaaagatagtacacaaaagactcagttgccgtaacatagctataagt 2192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tatttgcatagtaaaaagatagtacacaaaagactcagttgccgtaacatagctataagt 840
Query: 2193 gaatctggtgtagccaaggtttcagggttcgggctttcccacatcaggcctctacatgaa 2252
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 841 gaatctggtgtagccaaggtttcaggattcgggctttcccacatcaggcctctacatgaa 900
Query: 2253 actccagactacactcgctggacttcccatgaaatgctaaaacagacaaggttcaacccc 2312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 actccagactacactcgctggacttcccatgaaatgctaaaacagacaaggttcaacccc 960
Query: 2313 aaagccgaaatctggtcttatggtgtcctcatgtgggaggttttcacaataggggccacg 2372
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aaagccgacatctggtcttatggtgtcctcatgtgggaggttttcacaataggggccacg 1020
Query: 2373 ccatattcccattcagctaataaagaagtggcagctagaattataagaggcatgagacca 2432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ccatattcccattcagctaataaagaagtggcagctagaattataagaggcatgagacca 1080
Query: 2433 tctcagccttcatatgttggagacgagctcttccaactgtgtctccaatgttggcaggtg 2492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tctcagccttcatatgttggagacgagctcttccaactgtgtctccaatgttggcaggtg 1140
Query: 2493 gacccggatgagagaccatcttttacttccctattgaatgaattgctgccactggccgag 2552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gacccggatgagagaccatcttttacttccctattgaatgaattgctgccactggccgnn 1200
Query: 2553 agcccgggaacctgcagcctaagtttcactcactacaacggctt 2596
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 agcccgggaacctgcagcctaagtttcactcactacaacggctt 1244
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 351,170
Number of extensions: 6912
Number of successful extensions: 6912
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6912
Number of HSP's successfully gapped: 1
Length of query: 3142
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3124
Effective length of database: 8,109,745
Effective search space: 25334843380
Effective search space used: 25334843380
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)