BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14226 (UTR included)
(2506 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1A10 1392 0.0
>BF01056A1A10
Length = 729
Score = 1392 bits (702), Expect = 0.0
Identities = 726/734 (98%), Gaps = 5/734 (0%)
Strand = Plus / Plus
Query: 433 gaatttcactaaattagttatgacgttcgttagtaaacttaaataacatagtgtataatt 492
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gaatttcactaaattagttatgacgttcgttagtaaa-----ataacatagtgtataatt 55
Query: 493 atttaaaaatgaatgtaaataatatcgcagaagatcgtttagctcctgctttagatgtta 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atttaaaaatgaatgtaaataatatcgcagaagatcgtttagctcctgctttagatgtta 115
Query: 553 ttgaaagtccacggaaaagaatgcgcgtcgataattcctctcgcaaaagctggagtttga 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 ttgaaagtccacggaaaagaatgcgcgtcgataattcctctcgcaaaagctggagtttga 175
Query: 613 tggacagaagaactgattctgatgttctcaatgagatgggtgtcagtttattggacccgg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tggacagaagaactgattctgatgttctcaatgagatgggtgtcagtttattggacccgg 235
Query: 673 aggaggagcaatcagagcataatgtgcagaaatcattaaaaagaaaacacgacatagaga 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aggaggagcaatcagagcataatgtgcagaaatcattaaaaagaaaacacgacatagaga 295
Query: 733 atgttaatcctaatgtgaacagcgtgtcccggggacggttcagccccaggtccccactga 792
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 296 atgttaatcctaatgtgaacagcgtgacccggggacggttcagccccaggtccccactga 355
Query: 793 agatgagccccggaccctctaaggtactggccaggagtccacgcagctgtgataaggcca 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 agatgagccccggaccctctaaggtactggccaggagtccacgcagctgtgataaggcca 415
Query: 853 agccggatctggactcgtcgctgcccctgacatatgtcaatgatgaggagacgccgctcg 912
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 416 agccggatctggactcgtcgctgcccctgacgtatgtcaatgatgaggagaccccgctcg 475
Query: 913 gccaatcggtggccgtttcgtgtaaacacgcggcaaaacctcacaacaccagcaagaagg 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gccaatcggtggccgtttcgtgtaaacacgcggcaaaacctcacaacaccagcaagaagg 535
Query: 973 aaaactatttcgatttggccccccccgtgcccagcccccccgcggacggaggggactcct 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aaaactatttcgatttggccccccccgtgcccagcccccccgcggacggaggggactcct 595
Query: 1033 tcctgtctctatcagacgaggtggtgctgtcagtgatgcgctggctgccgaagaggacgc 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tcctgtctctatcagacgaggtggtgctgtcagtgatgcgctggctgccgaagaggacgc 655
Query: 1093 tagctcactgtatgctggtctgcaaacgatggcgtcgaatagcctccgatgagaccctct 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tagctcactgtatgctggtctgcaaacgatggcgtcgaatagcctccgatgagaccctct 715
Query: 1153 ggacccgtctggac 1166
||||||||||||||
Sbjct: 716 ggacccgtctggac 729
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 275,969
Number of extensions: 6410
Number of successful extensions: 6410
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6409
Number of HSP's successfully gapped: 1
Length of query: 2506
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2489
Effective length of database: 8,119,229
Effective search space: 20208760981
Effective search space used: 20208760981
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)