BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14237 (UTR included)
(1618 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1971_C1 1653 0.0
>BF14_1971_C1
Length = 1317
Score = 1653 bits (834), Expect = 0.0
Identities = 849/854 (99%)
Strand = Plus / Plus
Query: 765 gaagaaaatgttaacgcctatttcgtcgtcacaagcacttggtgcaaggcactgtgttgt 824
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagaaaatgttaacgcctattttgtcgtcacaagcacttggtgcaaggcactgtgttgt 60
Query: 825 atttgtggaatcctaactggatgttacttttgctgctgtctgtgctgctgttgtaattgc 884
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 atttgtggaatcctaactggatgttacttttgctgctgcctgtgctgctgttgtaattgc 120
Query: 885 tgctgcggcaaatgtaaacctcgtccgcctgaagaatctggtgactatcacaccctggag 944
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctgcggcaaatgtaaaccccgtccgcctgaagaatctggtgactatcacaccctggag 180
Query: 945 cgagatgattcagacggagttcaacctgtcacaatgcagcccggaggtgaaggccgtccg 1004
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgagatgattcagacggagttcaacctgtcacaatgcagcccggaggtgaaggccgtcca 240
Query: 1005 accggtgaacaggcgccacccatcgcaatgccgatgcccatgccggcgccggcgtcgggc 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accggtgaacaggcgccacccatcgcaatgccgatgcccatgccggcgccggcgtcgggc 300
Query: 1065 gcctccgaaaatacggggctcaacacagggggcagtattccaaaatacacatgaagtagt 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcctccgaaaatacggggctcaacacagggggcagtattccaaaatacacatgaagtagt 360
Query: 1125 tacatcttaatctaacattatttgtaagagaaatgaggaactgactacttattaccacca 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tacatcttaatctaacattatttgtaagagaaatgaggaactgactacttattaccacca 420
Query: 1185 acaatgcacctttcagctgtaagcctaaaatatttatttatttattttattaaattttat 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaatgcacctttcagctgtaagcctaaaatatttatttatttattttattaaattttat 480
Query: 1245 agtttatatatatatttttttactattctttgatactttaattttattaaacattattgt 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtttatatatatatttttttactattctttgatactttaattttattaaacattattgt 540
Query: 1305 aaaaggaatttgtattttgtttttatcgttatattgcttataaagtttgagtgtaaaatc 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaaggaatttgtattttgtttttatcgttatattgcttataaagtttgagtgtaaaatc 600
Query: 1365 tgcaatgttgtaggtataagtagttgatgattgttgaacctatgtgttatatattcagtc 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgcaatgttgtaggtataagtagttgatgattgttgaacctatgtgttatatattcagtc 660
Query: 1425 aaagctttaatatcaatgttcttaatgctgattccataagtattacatttagcgaggaga 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaagctttaatatcaatgttcttaatgctgattccataagtattacatttagcgaggaga 720
Query: 1485 tgggtttgaagagattactgttttggaattacgccaccgtagctaatgcgacctagtttt 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgggtttgaagagattactgttttggaattacgccaccgtagctaatgcgacctagtttt 780
Query: 1545 attgtaatgtgttaacttattccattaatttttttataacgaattaaataatctaatatt 1604
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 781 attgtaatgtgttaacttattccattattttttttataacgaattaaataatctaatatt 840
Query: 1605 ttcatagaaaagat 1618
||||||||||||||
Sbjct: 841 ttcatagaaaagat 854
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,984
Number of extensions: 7848
Number of successful extensions: 7848
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7846
Number of HSP's successfully gapped: 1
Length of query: 1618
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1601
Effective length of database: 8,119,229
Effective search space: 12998885629
Effective search space used: 12998885629
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)