BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14242 (UTR included)
(1225 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052B2D12 672 0.0
BF01040A2B01 587 e-167
BF01001X1A11 78 4e-14
>BF01052B2D12
Length = 734
Score = 672 bits (339), Expect = 0.0
Identities = 387/403 (96%)
Strand = Plus / Minus
Query: 591 gcaatgaacgtcatgttctgttcagctatgatagacgaaccccaagtgattcagttcaca 650
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 455 gcaatgaacgtcatgttctgttcagctatgatagacgaaccccaagtgactcagttcaca 396
Query: 651 gctgaccgtccgttcttcgtggccatcgtctccaacgagaccatttacttcacagccact 710
|||||||||||||| || ||||||||| | ||||| ||||||||| ||||||||||||||
Sbjct: 395 gctgaccgtccgttttttgtggccatcatttccaaagagaccattcacttcacagccact 336
Query: 711 taccgcggaaactgaacctcacatacaacgaacacaccaaacaacacgtccacatagcta 770
||||| ||||| ||||||||||||||||||||| | ||||||||||||||| || | |||
Sbjct: 335 taccggggaaattgaacctcacatacaacgaaccccccaaacaacacgtccccacaacta 276
Query: 771 aatgtactgcatttaaaacatatatattatataagcataaataagcaaagatttaatgat 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aatgtactgcatttaaaacatatatattatataagcataaataagcaaagatttaatgat 216
Query: 831 aaatatattttgttaataactgacaataattatcccgccttcattacgagcacattgttt 890
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 215 aaatatattttgttaataactgacaataattatcccgccttcattacaagcacattgttt 156
Query: 891 tgtgcaatataatataacttatatgttcaaatacaaaaagcatttaggattattgtatac 950
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 cgtgcaatataatataacttatatgttcaaatacaaaaagcatttaggattattgtatac 96
Query: 951 tcttaattaatgagattttatttatataaatatatttatactc 993
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tcttaattaatgagattttatttatataaatatatttatactc 53
>BF01040A2B01
Length = 826
Score = 587 bits (296), Expect = e-167
Identities = 323/332 (97%)
Strand = Plus / Plus
Query: 1 taatgtttattgatccacgtaacattaaattctactgaataaataaaggttaataacaac 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 495 taatgtttattgatccacgtaatattaaattctactgaataaataaaggttaataacaac 554
Query: 61 agttacattgttgctcatcaaatattactgaaatgcatgttaaattactttttaacccaa 120
||||| |||||| |||||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 555 agttatcttgttggtcatcaaatattactgaattgcatgttaaattaatttctaacccaa 614
Query: 121 aaaaagaaacggttttccactggatacacactacattatcattaacattctgggtgttat 180
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 615 aaaaagaaactgttttccactggatacatactacattatcattaacattctgggtgttat 674
Query: 181 tttacattaaacgcttccgggtaagggtttgtgatgtttgtgtttatttatttgatgtcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tttacattaaacgcttccgggtaagggtttgtgatgtttgtgtttatttatttgatgtcg 734
Query: 241 ggttgccggcggccagtgggagtttcacgcaggaagcgtgaactgacggtggaagtgcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ggttgccggcggccagtgggagtttcacgcaggaagcgtgaactgacggtggaagtgcgt 794
Query: 301 gtggatcgtcccgcgctctggtgcttactggc 332
||||||||||||||||||||||||||||||||
Sbjct: 795 gtggatcgtcccgcgctctggtgcttactggc 826
>BF01001X1A11
Length = 309
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 553 ggcatggtgatgatgatgcggtgcgcgccgatgcctccg 591
|||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggcatggtgatgatgatgcggtgcgcgccgatgcctccg 264
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 180,338
Number of extensions: 4379
Number of successful extensions: 4379
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4377
Number of HSP's successfully gapped: 3
Length of query: 1225
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1208
Effective length of database: 8,119,229
Effective search space: 9808028632
Effective search space used: 9808028632
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)