BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14261 (UTR included)
(1465 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A2H11 1491 0.0
>BF01039A2H11
Length = 805
Score = 1491 bits (752), Expect = 0.0
Identities = 785/796 (98%)
Strand = Plus / Plus
Query: 399 accataaacgctataagcgatattagttgcattttgcgtagtgagtcttgaaaacgtcgt 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 accataaacgctataagcgatattagttgcattttgcgtagtgagtcttgaaaacgtcgt 69
Query: 459 ttcagtatcgatctgtatattttacattataaaattttcataatgccggccaaagcggtt 518
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 70 ttcagtatcgatctgtatattctacattataaaattttcataatgccggccaaagcggtt 129
Query: 519 tgcgttctcaatggagatgttagcggcactgttttcttcgatcagaaggacgacaaagcc 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tgcgttctcaatggagatgttagcggcactgttttcttcgatcagaaggacgacaaagcc 189
Query: 579 ccagttgtcgtgacgggtgaagtgaaagggctttcaaagggcaagcacggtttccacatc 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ccagttgtcgtgacgggtgaagtgaaagggctttcaaagggcaagcacggtttccacatc 249
Query: 639 catgagtttggggacaacacaaacggctgcacatcggccggacctcacttcaatccacag 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 catgagtttggggacaacacaaacggctgcacatcggccggacctcacttcaatccacag 309
Query: 699 aagcaagaccacggtgcccctgatgctgctatccgacatgtcggagaccttggaaatatt 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aagcaagaccacggtgcccctgatgctgctatccgacatgtcggagaccttggaaatatt 369
Query: 759 gaagccggcagtgacggaggtgtcactaaggtatgcatccaagattcccagatctctctg 818
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaagccggcagtgacggaggcgtcactaaggtatgcatccaagattcccagatctctctg 429
Query: 819 tgcggcccgaatagcatcattggccgtactctggttgtgcacgctgatcctgacgacctc 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tgcggcccgaatagcatcattggccgtactctggttgtgcacgctgatcctgacgacctc 489
Query: 879 ggcatcggcggtcatgaactgagcaagacgactggcaatgccggagctcgggtcgcttgt 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ggcatcggcggtcatgaactgagcaagacgactggcaatgccggagctcgggtcgcttgt 549
Query: 939 ggggttattggcctcgctaagatctaaattaatatcacggggatagtagagacattagcc 998
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 550 ggggttattggcctcgctaagatctaaattaatttcacggggatagtagagacattagcc 609
Query: 999 cgcaaagcaaatgtttgatccctaatttccatattatgttgtcagatgtataattggcgg 1058
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cgtaaagcaaatgtttgatccctaatttccatattatgttgtcagatgtataattggcgg 669
Query: 1059 ttgtaaattatcagagttatgtaaaaggcatatgttatagcagtttagcaaaacgtttat 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ttgtaaattatcagagttatgtaaaaggcatatgttatagcagtttagcaaaacgtttat 729
Query: 1119 cggacacgaatgtgtcgctttactttaagttctacaacctgtgcacgtctccgtgatagc 1178
|| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 730 cgtacacatgtgtgtcgctttaatttaagttctataacctgtggacgtctccgtgatagc 789
Query: 1179 tgtttattggtttgtg 1194
||||||||||||||||
Sbjct: 790 tgtttattggtttgtg 805
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 198,118
Number of extensions: 4598
Number of successful extensions: 4598
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4598
Number of HSP's successfully gapped: 1
Length of query: 1465
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1448
Effective length of database: 8,119,229
Effective search space: 11756643592
Effective search space used: 11756643592
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)