BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14266 (UTR included)
(3203 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1D11 1021 0.0
BF01061B2E12 628 e-179
BF01027A2C07 84 2e-15
>BF01012A1D11
Length = 824
Score = 1021 bits (515), Expect = 0.0
Identities = 534/539 (99%), Gaps = 1/539 (0%)
Strand = Plus / Plus
Query: 2666 atttgtacattctggccggacacgaggcttcatattaaataaaaattgtctttatggtta 2725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttgtacattctggccggacacgaggcttcatattaaataaaaattgtctttatggtta 60
Query: 2726 ttatagtaagcgattcttgctataagtgatattctgggttgcaaccgcccataaaccagc 2785
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 ttatagtaagctattcttgctataagtgatattctgggttgcaaccgcccatacaccagc 120
Query: 2786 ctcgagatgaaaggttcatgtataactttattctgttaaagctgtccggcttaacaaagt 2845
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcgagatgaaaggttcatacataactttattctgttaaagctgtccggcttaacaaagt 180
Query: 2846 gcacgaccagaaccatacataggtttggtttcgtggtttgcagtgacttgacaatagatt 2905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcacgaccagaaccatacataggtttggtttcgtggtttgcagtgacttgacaatagatt 240
Query: 2906 atagtttgcagcttccc-agtgagaaacaatcgaatattatgatatattaaatagatatt 2964
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atagtttgcagcttccccagtgagaaacaatcgaatattatgatatattaaatagatatt 300
Query: 2965 gggttatattgatcgatgttattcacatcttaggcccgagcactgccattttattaaaat 3024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggttatattgatcgatgttattcacatcttaggcccgagcactgccattttattaaaat 360
Query: 3025 ccattccgtggatgtttgaagcaataaatatattattcgtgaccatctctagataaggct 3084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccattccgtggatgtttgaagcaataaatatattattcgtgaccatctctagataaggct 420
Query: 3085 gtagcataaaacaaatacaatattaatgtttcgctagttaaaaacattaacatgaaagat 3144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtagcataaaacaaatacaatattaatgtttcgctagttaaaaacattaacatgaaagat 480
Query: 3145 ataaaacgccgcttctatttataaaggatagcacaaacattgaaatcccacgacggtgt 3203
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ataaaacgccgcttctatttataaaggatagcacaaacattgaaatcccacgacggtgt 539
>BF01061B2E12
Length = 786
Score = 628 bits (317), Expect = e-179
Identities = 320/321 (99%)
Strand = Plus / Plus
Query: 179 aggacatctatcacgtgacgggtcccctcacggaacttcagatcgcctacatgtgtaagg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggacatctatcacgtgacgggtcccctcacggaacttcagatcgcctacatgtgtaagg 240
Query: 239 aaacgcttaccggtctatcatacttacacagcatggggaagatgcatagggatataaagg 298
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 aaacgcttaccggtctatcatacttacacagcatggggaagatgcatagggacataaagg 300
Query: 299 gggccaatatacttttaaccgagtgtggtgatgtgaagctcgccgacttcggagtatcag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggccaatatacttttaaccgagtgtggtgatgtgaagctcgccgacttcggagtatcag 360
Query: 359 cacagatcacagctaccatcaacaagaggaagagcttcattggcacgccgtactggatgg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacagatcacagctaccatcaacaagaggaagagcttcattggcacgccgtactggatgg 420
Query: 419 cacccgaggtcgcagccgttgagaggaagggtggatacaatcagctgtgtgatatttggg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cacccgaggtcgcagccgttgagaggaagggtggatacaatcagctgtgtgatatttggg 480
Query: 479 cctgtggtatcacagctatag 499
|||||||||||||||||||||
Sbjct: 481 cctgtggtatcacagctatag 501
>BF01027A2C07
Length = 744
Score = 83.8 bits (42), Expect = 2e-15
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 598 aggagcctcttgcaatatattgacgaagaattaatgctcagg 639
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 aggagcctcttgcaatatattgacgaagaattaatgctcagg 169
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 322,854
Number of extensions: 8139
Number of successful extensions: 8139
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8138
Number of HSP's successfully gapped: 3
Length of query: 3203
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3185
Effective length of database: 8,109,745
Effective search space: 25829537825
Effective search space used: 25829537825
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)