BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14268 (UTR included)
(1723 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013B1H04 1346 0.0
BF01037B2G06 230 6e-60
BF14_1630_C1 198 2e-50
BF01054B1B02 190 5e-48
>BF01013B1H04
Length = 687
Score = 1346 bits (679), Expect = 0.0
Identities = 685/687 (99%)
Strand = Plus / Plus
Query: 511 gcgtagctttgcgttcagttgcggcgcgacagtccacagctctcgtccgcacctcggcta 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgtagctttgcgttcagttgcggcgcgacagtccacagctctcgtccgcacctcggcta 60
Query: 571 cagaatccggtgtccgtgatgagaaaaacttcccccgtcccgtgaggggagaacctggga 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagaatccggtgtccgtgatgagaaaaacttcccccgtcccgtgaggggagaacctggga 120
Query: 631 aagtcagactcggctttttacccgaagaatggttccaattcttccattccaaaactggtg 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagtcagactcggctttttacccgaagaatggttccaattcttccattccaaaactggtg 180
Query: 691 ttaccggcccctacgcatttggtgtaggactcgccacgtacctgtgcagcaaggagatct 750
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 181 ttaccggcccctacgcatttggtgtaggtctcgccacgtacctgtgcagcaaggagatct 240
Query: 751 atattatggagcatgaatactacacagggctgtccatcgccctcatggtgtacttcggta 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atattatggagcatgaatactacacagggctgtccatcgccctcatggtgtacttcggta 300
Query: 811 ctactaagtttggacccaaaatagctgcttggttggataaggaagtcgatgccgtagaaa 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctactaagtttggacccaaaatagctgcttggttggataaggaagtcgatgccgtagaaa 360
Query: 871 gcagctggaaccagggtcgagaggaaagcattaatgacctgaagaaggctatcgaggatg 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcagctggaaccagggtcgagaggaaagcattaatgacctgaagaaggctatcgaggatg 420
Query: 931 aaaaggatgctcagtggcgcgccaacggtcaggaactactgatagctgccaagaaagaaa 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaaggatgctcagtggcgcgccaacggtcaggaactactgatagctgccaagaaagaaa 480
Query: 991 acgttcttctgcagctcgaagcagcgtacagggaacgcatgatgatggtttatagcgaag 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acgttcttctgcagctcgaagcagcgtacagggaacgcatgatgatggtttatagcgaag 540
Query: 1051 tcaaacgccgtctggattaccagctggagaaaaccaacctggagagacgcatcgctcaga 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcaaacgccgtctggattaccagctggagaaaaccaacctggagagacgcatcgctcaga 600
Query: 1111 agaatatggttgactggatcgtggccaacgtcaccaaggccattacacccgaccaagaga 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 601 agaatatggttgactggatcgtggccaacgtcaccaaggccattacacccgaccaggaga 660
Query: 1171 agcaggccatggaccgctgcatcgcag 1197
|||||||||||||||||||||||||||
Sbjct: 661 agcaggccatggaccgctgcatcgcag 687
>BF01037B2G06
Length = 830
Score = 230 bits (116), Expect = 6e-60
Identities = 121/123 (98%)
Strand = Plus / Minus
Query: 1 atactataagcactaaataactacataagctagtaaaaattaacaaaccatccttttcca 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atactataagcactaaatatctacataagctagtaaaaattaacaaaccatccttttcca 67
Query: 61 taaaatattattaatatttgccattttccttttcaaaagtcttaaatttacttttaaaat 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 66 taaaatattattaatatttgccattttccttttcaaaagncttaaatttacttttaaaat 7
Query: 121 atg 123
|||
Sbjct: 6 atg 4
>BF14_1630_C1
Length = 811
Score = 198 bits (100), Expect = 2e-50
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 48 ccatccttttccataaaatattattaatatttgccattttccttttcaaaagtcttaaat 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ccatccttttccataaaatattattaatatttgccattttccttttcaaaagtcttaaat 771
Query: 108 ttacttttaaaatatgaatttcagaaatataagatgtttt 147
||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ttacttttaaaatatgaatttcagaaatataagatgtttt 811
>BF01054B1B02
Length = 695
Score = 190 bits (96), Expect = 5e-48
Identities = 99/100 (99%)
Strand = Plus / Minus
Query: 49 catccttttccataaaatattattaatatttgccattttccttttcaaaagtcttaaatt 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 catccttttccataaaatattattaatatttgccattttccttttcaaaagtcttaaatt 41
Query: 109 tacttttaaaatatgaatttcagaaatataagatgtttta 148
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 40 tactttcaaaatatgaatttcagaaatataagatgtttta 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 217,672
Number of extensions: 4618
Number of successful extensions: 4618
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 4618
Number of HSP's successfully gapped: 4
Length of query: 1723
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1706
Effective length of database: 8,119,229
Effective search space: 13851404674
Effective search space used: 13851404674
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)