BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14271 (UTR included)
(2269 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2073_C1 1707 0.0
BF01020B1E11 541 e-153
>BF14_2073_C1
Length = 1126
Score = 1707 bits (861), Expect = 0.0
Identities = 956/987 (96%), Gaps = 3/987 (0%)
Strand = Plus / Plus
Query: 497 atgtatgaacgggaagataaacttcagggagaaggagaaacagatcctggaccagatcct 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atgtatgaacgggaagataaacttcagggagaaggagaaacagatcctggaccagatcct 202
Query: 557 gggccccgggagatacgacgctcgcatccggccatccggcatcaacggcactggcgatgc 616
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 203 gggccccgggagatacgacgctcgcatccggccatccggcatcaacggcactg---atgg 259
Query: 617 gccaacgttagtccgcgtcaacctgtacctacgatccatcagcaaaatagatgattacaa 676
|||| | ||||| ||||||| | | | ||| || ||||| ||||| ||
Sbjct: 260 gccagccgtagtcagcgtcaatatatttgtccgaagtatatcaaaaatcgatgacgtcac 319
Query: 677 aatggaatactctgtccaattgacattcagagaacaatggttagatgagagattgaaatt 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aatggaatactctgtccaattgacattcagagaacaatggttagatgagagattgaaatt 379
Query: 737 taacaatttaggcgatcgtctcaagtacctgaccctcacggaagccaacagggtatggat 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taacaatttaggcgatcgtctcaagtacctgaccctcacggaagccaacagggtatggat 439
Query: 797 gccggatctgttcttctccaatgagaaagaggggcacttccacaacatcattatgccgaa 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gccggatctgttcttctccaatgagaaagaggggcacttccacaacatcattatgccgaa 499
Query: 857 cgtgtacatcaggatcttccccaacgggaacgtgctgtacagcatccgaatctctctcac 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 500 cgtgtacatcaggatcttccccaacgggaacgtgctgtacagcatccgaatctctcttac 559
Query: 917 cttgtcatgtccgatgaacctaaagttatatcctttggacaagcagacgtgttctctgag 976
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cttgtcatgcccgatgaacctaaagttatatcctttggacaagcagacgtgttctctgag 619
Query: 977 aatggccagttacggctggacaactgacgacttggtgttcctgtggaaggaaggtgatcc 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aatggccagttacggctggacaactgacgacttggtgttcctgtggaaggaaggtgatcc 679
Query: 1037 agtgcaggtggtcaagaacctgcacctcccgcggttcactctggagaagttcctcacaga 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agtgcaggtggtcaagaacctgcacctcccgcggttcactctggagaagttcctcacaga 739
Query: 1097 ttactgcaacagcaagactaatactggtgaatacagctgtttgaaggtggacctgctgtt 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttactgcaacagcaagactaatactggtgaatacagctgtttgaaggtggacctgctgtt 799
Query: 1157 caagagagagttcagttactacctcatccagatctacattccctgctgcatgctggttat 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 caagagagagttcagttactacctcatccagatctacattccctgctgcatgctggttat 859
Query: 1217 agtgtcgtgggtgtcgttctggttagaccagggagccgttcccgcccgagtgtcccttgg 1276
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 860 agtgtcgtgggtgtcgttctggctagaccagggagccgttcccgcccgagtgtcccttgg 919
Query: 1277 agtgacgaccctactgaccatggcgactcagtcgtccgggatcaacgcgtccctaccccc 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 agtgacgaccctactgaccatggcgactcagtcgtccgggatcaacgcgtccctaccccc 979
Query: 1337 cgtctcgtacacgaaggccatcgacgtatggacgggggtgtgtctgaccttcgtgttcgg 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 cgtctcgtacacgaaggccatcgacgtatggacgggggtgtgtctgaccttcgtgttcgg 1039
Query: 1397 ggcgctgttggagttcgccctggtgaattatgcgtcccgctccgacatgcacagggagaa 1456
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1040 ggcgctgttggagttcgccctggtgaactatgcgtcccgctccgacatgcacagggagaa 1099
Query: 1457 catgaagaaaacgagacgggagatgga 1483
|||||||||||||||||||||||||||
Sbjct: 1100 catgaagaaaacgagacgggagatgga 1126
>BF01020B1E11
Length = 705
Score = 541 bits (273), Expect = e-153
Identities = 280/281 (99%), Gaps = 1/281 (0%)
Strand = Plus / Plus
Query: 1990 ccgattgtccgaacggttcctattgaaccctcgctggtcactcgcccgctcttcggaatc 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgattgtccgaacggttcctattgaaccctcgctggtcactcgcccgctcttcggaatc 60
Query: 2050 cttaaactatgcatccggcgaatacaccccttgttattatttattttctcccgattggtt 2109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttaaactatgcatccggcgaatacaccccttgttattatttattttctcccgattggtt 120
Query: 2110 taccaaggcccatctttcgttacatcctgtgactccgttcgaa-actttctcattacagc 2168
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 taccaaggcccatctttcgttacatcctgtgactccgttcgaagactttctcattacagc 180
Query: 2169 tgacctggtgtagggcgccatcgcagtttagacatagactatagttagcttccacgagac 2228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgacctggtgtagggcgccatcgcagtttagacatagactatagttagcttccacgagac 240
Query: 2229 acagactgcaccttcacgacactgctagctggtgagagtgt 2269
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acagactgcaccttcacgacactgctagctggtgagagtgt 281
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 191,840
Number of extensions: 3665
Number of successful extensions: 3665
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3664
Number of HSP's successfully gapped: 3
Length of query: 2269
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2252
Effective length of database: 8,119,229
Effective search space: 18284503708
Effective search space used: 18284503708
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)