BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14273 (UTR included)
(1600 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A2G07 1402 0.0
BF14_1866_C1 127 6e-29
>BF01022A2G07
Length = 744
Score = 1402 bits (707), Expect = 0.0
Identities = 733/742 (98%)
Strand = Plus / Plus
Query: 483 tcaattaaagtttagacaatgtcgagacccggtgatagaccaaaccaggcacaaacctac 542
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcaattaaagtttaaaaaatgtcgagacccggtgatagaccaaaccaggcacaaacctac 60
Query: 543 aagcttgtcgtcgtcggcggcggtggtgtcggaaagagtgcgatcacgatacaatttata 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcttgtcgtcgtcggcggcggtggtgtcggaaagagtgcgatcacgatacaatttata 120
Query: 603 cagagttacttcgtcactgattacgaccccaccatcgaagacagttacaccaagcagtgt 662
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagagttactttgtcactgattacgaccccaccatcgaagacagttacaccaagcagtgt 180
Query: 663 gttatcgatgacatccccgccaaacttgatattttagatacggctggccaagaggagttc 722
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 181 gttatcgatgacatccccgccaaacttgatattttagatacagctggccaagaagagttc 240
Query: 723 tcggctatgcgggagcaatacatgcggtcaggggagggcttcctgctcgtcttctctgta 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcggctatgcgggagcaatacatgcggtcaggggagggcttcctgctcgtcttctctgta 300
Query: 783 gccgatcatgccagctttgacgagctgttcaagttccacaaacagatcctcagggtcaag 842
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 301 gcggatcatgccagctttgacgagctgttcaagttccacaaacagatccttagggtcaag 360
Query: 843 gacagagacgagttccccatgctcatggtgggcaataaagccgatttagaacaccagaga 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gacagagacgagttccccatgctcatggtgggcaataaagccgatttagaacaccagaga 420
Query: 903 gtggtaaccctggacgaggcgcaggctttgtcccgccaactaaaggtaccttacatagaa 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtggtaaccctggacgaggcgcaggctttgtcccgccaactaaaggtaccttacatagaa 480
Query: 963 tgtagtgcgaaggcgagaatgaacgtagaccaggcattccacgagctagttagactggtg 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtagtgcgaaggcgagaatgaacgtagaccaggcattccacgagctagttagactggtg 540
Query: 1023 aggaggttccaggaggcggagaggatccacatcaagtcagaacagagaagcagaaagaaa 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aggaggttccaggaggcggagaggatccacatcaagtcagaacagagaagcagaaagaaa 600
Query: 1083 aaatgcacaattttgtaacgataataacaaataaatagatgtcaaattcaaatgacagat 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaatgcacaattttgtaacgataataacaaataaatagatgtcaaattcaaatgacagat 660
Query: 1143 gtgttttgacatatgcaatacttctatatagctgtcacttgaggagggaaatgcatattg 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtgttttgacatatgcaatacttctatatagctgtcacttgaggagggaaatgcatattg 720
Query: 1203 tttttaaaacaaatatgtacct 1224
||| | ||||||||||||||||
Sbjct: 721 tttntgaaacaaatatgtacct 742
>BF14_1866_C1
Length = 883
Score = 127 bits (64), Expect = 6e-29
Identities = 64/64 (100%)
Strand = Plus / Minus
Query: 1 agaatttctatttaaaaagcttatgaatttatcttctgcgtgtataaatattaaataaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 agaatttctatttaaaaagcttatgaatttatcttctgcgtgtataaatattaaataaag 6
Query: 61 tctc 64
||||
Sbjct: 5 tctc 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 330,334
Number of extensions: 11539
Number of successful extensions: 11539
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 11539
Number of HSP's successfully gapped: 2
Length of query: 1600
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1583
Effective length of database: 8,119,229
Effective search space: 12852739507
Effective search space used: 12852739507
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)