BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14284 (UTR included)
(3529 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A2F08 1451 0.0
>BF01026A2F08
Length = 764
Score = 1451 bits (732), Expect = 0.0
Identities = 756/764 (98%)
Strand = Plus / Plus
Query: 1277 gcgcgagatcatcaacaccaatcaaatgccacaagtgacaatccgccagccgatgccgat 1336
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 gcgcgacatcatcaacaccaatcaaatgccacaagtgacaatccgacagccgatgccgat 60
Query: 1337 gccaatgccggtcaaggaaccggaagtgagaatgctaccagttccactgccgccaaactt 1396
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 gccaatgccggtcaaggaaccggaagtgagaatgctaccagtgccactgccgccaaactt 120
Query: 1397 accacctgggaagaaggttttgatcaatccgcacttcaaagggaatttccaacctccggt 1456
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 gccacctgggaagaaggttttgatcaatccacacttcaaagggaatttccaacctccggt 180
Query: 1457 cgaagggctcgcctacataccgactcggatcattaagacaccgccggttagtcctacttt 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgaagggctcgcctacataccgactcggatcattaagacaccgccggttagtcctacttt 240
Query: 1517 ggaagcgaaattcggtccatcgttgccagtagatgaggccgctgaaaggtttatagcaga 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 241 ggaagcgaaattcggtccatcgttgccagtagatgaggccgctgaaaggtttatagctga 300
Query: 1577 acaaagacaagcattggcaagggcagccgcaaggaatagagaaccaatgaggtatataga 1636
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 301 acaaagacaagcattggcaagggcagcggcaaggaatagagaaccaatgaggtatataga 360
Query: 1637 aaatacgactattgagatcgagaacgagctggcgcggtccagccgaaggtctgatgatga 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaatacgactattgagatcgagaacgagctggcgcggtccagccgaaggtctgatgatga 420
Query: 1697 tctgcttaggagacaggaagaattcatcaacgctaacagggctggtctcaggagacggat 1756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctgcttaggagacaggaagaattcatcaacgctaacagggctggtctcaggagacggat 480
Query: 1757 gcggtcaccgtcccctcgtcggagccctgaacgtgcacggagccctgatagacgaagaac 1816
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcggtccccgtcccctcgtcggagccctgaacgtgcacggagccctgatagacgaagaac 540
Query: 1817 agatgagcaggaaagtgattatagacgtcgcgtgagagagcaggagacgttaagagagag 1876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agatgagcaggaaagtgattatagacgtcgcgtgagagagcaggagacgttaagagagag 600
Query: 1877 agttttacgtgctaaggaagttaggaggagaaaaaatgctgtcgcgttacaaaggagatt 1936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agttttacgtgctaaggaagttaggaggagaaaaaatgctgtcgcgttacaaaggagatt 660
Query: 1937 gtctgataaagacaaagatcacgagaaagaagttaaaatagaagagaagaaagacgtcaa 1996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtctgataaagacaaagatcacgagaaagaagttaaaatagaagagaagaaagacgtcaa 720
Query: 1997 gccggcggtgttaccagaacagaatataccagatacaacaagga 2040
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gccggcggtgttaccagaacagaatataccagatacaacaagga 764
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 484,596
Number of extensions: 33828
Number of successful extensions: 33828
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 33828
Number of HSP's successfully gapped: 1
Length of query: 3529
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3511
Effective length of database: 8,109,745
Effective search space: 28473314695
Effective search space used: 28473314695
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)