BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14329 (UTR included)
(1636 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B2B10 1467 0.0
BF01060A2C03 72 3e-12
>BF01050B2B10
Length = 758
Score = 1467 bits (740), Expect = 0.0
Identities = 753/758 (99%)
Strand = Plus / Plus
Query: 317 tagggcgcataaaagccgagtgtcgatcagcgcgcgcgccattcgttcacagaccgccgc 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagggcgcataaaagccgagtgtcgatcagcgcgcgcgccattcgttcacagaccgccgc 60
Query: 377 gagaataacaacaatgatactcccgagtcgtaccacgtctcccacacacggggccttcca 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagaataacaacaatgatactcccgagtcgtaccacgtctcccacacacggggccttcca 120
Query: 437 tcccccgacacacgcgcatcctgacgaggagcccgtctccaggacctaccagtacaggaa 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcccccgacacacgcgcatcctgacgaggagcccgtctccaggacctaccagtacaggaa 180
Query: 497 agttatgaagccgatgttggagaggaagagacgagcgcgcatcaatcgctgtctcgacga 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agttatgaagccgatgttggagaggaagagacgagcgcgcatcaatcgctgtctcgacga 240
Query: 557 gctgaaagacctcatggtcaccgcactccaggcggagggagagaacgtctccaagctgga 616
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 gctgaaagacctcatggtcaccgcactccaggcggaaggagagaacgtctccaagctgga 300
Query: 617 gaaagccgacatattggagttaaccgtccgtcacctccacagcctcaaacggagaggtca 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaagccgacatattggagttaaccgtccgtcacctccacagcctcaaacggagaggtca 360
Query: 677 gctcgtgttgaaacccgaaatgtcttacgcggaacgtttccgcgcgggtttcgcccagtg 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctcgtgttgaaacccgaaatgtcttacgcggaacgtttccgcgcgggtttcgcccagtg 420
Query: 737 tgctactgaagtgtctcagttcataaccagcgctacggtcgcggccaacgcgatgcagcg 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgctactgaagtgtctcagttcataaccagcgctacggtcgcggccaacgcgatgcagcg 480
Query: 797 ccaaggaccagtggatcctcaagccggggctaggcttctccagcacctcagtaattgtat 856
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 481 ccaaggaccagtggatcctcaagccggggctcggcttctccagcacctcagtaattgtat 540
Query: 857 acgaaggctggaagcgcctgcggtacaacctccagtggtccagccgcagccgatcgcgcc 916
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acgaaggctggaagcacctgcggtacaacctccagtggtccagccgcagccgatcgcgcc 600
Query: 917 cggtggtgtcgcgaggcccacgccggttcaggccgtgccacccgtgctaccgacgcaggc 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cggtggtgtcgcgaggcccacgccggttcaggccgtgccacccgtgctaccgacgcaggc 660
Query: 977 cccacagatccaaaggacccttgagagagggctgaagaggctagcggaggaacccatcga 1036
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 661 cccacagatccaaaggacccttgagagagggctgaagaggctagcggannaacccatcga 720
Query: 1037 tgtggaaatgctcgacacaaaaagagtgtatccgcctt 1074
||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgtggaaatgctcgacacaaaaagagtgtatccgcctt 758
>BF01060A2C03
Length = 342
Score = 71.9 bits (36), Expect = 3e-12
Identities = 114/140 (81%)
Strand = Plus / Plus
Query: 495 aaagttatgaagccgatgttggagaggaagagacgagcgcgcatcaatcgctgtctcgac 554
||||| |||||||||||| | ||| | || || || || |||||||| |||||||||||
Sbjct: 122 aaagtgatgaagccgatgctcgagcgcaaaaggcgcgctcgcatcaaccgctgtctcgat 181
Query: 555 gagctgaaagacctcatggtcaccgcactccaggcggagggagagaacgtctccaagctg 614
||||| || || |||||||||| ||| ||||| |||| || || |||||| |||| |||
Sbjct: 182 gagctcaaggaactcatggtcagcgctctccaatcggaaggtgaaaacgtcgccaaactg 241
Query: 615 gagaaagccgacatattgga 634
|| |||||||| || |||||
Sbjct: 242 gaaaaagccgatattttgga 261
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 232,538
Number of extensions: 19189
Number of successful extensions: 19189
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 19189
Number of HSP's successfully gapped: 2
Length of query: 1636
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1619
Effective length of database: 8,119,229
Effective search space: 13145031751
Effective search space used: 13145031751
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)