BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14347 (UTR included)
(1789 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A2F06 563 e-160
>BF01051A2F06
Length = 822
Score = 563 bits (284), Expect = e-160
Identities = 287/288 (99%)
Strand = Plus / Minus
Query: 365 ttcagcgttcattagaatataccgagtctataacaacaacgcacacagagggcagtctga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 ttcagcgttcattagaatataccgagtctataacaacaacgcacacagagggcagtctga 759
Query: 425 ccgcggcggtcaaagcagaacgtcgcgttccaagagttcttttcccgccaagacagggaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ccgcggcggtcaaagcagaacgtcgcgttccaagagttcttttcccgccaagacagggaa 699
Query: 485 cgccggaaacgccgctatgtctgagcttgcaaacacggaaaagttgattgaattggttaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 cgccggaaacgccgctatgtctgagcttgcaaacacggaaaagttgattgaattggttaa 639
Query: 545 ggaaaggagtttattatacgatttaagtaatatagactacaaaaaccgcgataaaaaagc 604
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 638 ggaaaggagtttattatacgatttaagtaatatagactacaaaaaccgcgacaaaaaagc 579
Query: 605 tgaagcttggctcgaaattgccacagaaatgggatttggagagagtaa 652
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tgaagcttggctcgaaattgccacagaaatgggatttggagagagtaa 531
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 271,012
Number of extensions: 6642
Number of successful extensions: 6642
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6642
Number of HSP's successfully gapped: 1
Length of query: 1789
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1772
Effective length of database: 8,119,229
Effective search space: 14387273788
Effective search space used: 14387273788
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)