BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14349 (UTR included)
(1948 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2622_C1 1667 0.0
>BF14_2622_C1
Length = 1528
Score = 1667 bits (841), Expect = 0.0
Identities = 873/882 (98%), Gaps = 5/882 (0%)
Strand = Plus / Plus
Query: 1072 cacgtctcttcagccccaatatgcaatctttctacacctaccacggctcgatcaccacac 1131
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 cacgtctcttcagccccaatatgcaatctttctacacctaccacggctcgctcaccacac 61
Query: 1132 cactctgtcaggaggtcgtaacttggctagttatggacaagccactcatcatatctgaca 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cactctgtcaggaggtcgtaacttggctagttatggacaagccactcatcatatctgaca 121
Query: 1192 cccagtacaaactcttcagtaaagtggacgtcggcggcatcgacaattatagaagtcttc 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cccagtacaaactcttcagtaaagtggacgtcggcggcatcgacaattatagaagtcttc 181
Query: 1252 aagcaaacaacagagttatttaccgcagtttagcgtccagctcttccatagctctgccca 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aagcaaacaacagagttatttaccgcagtttagcgtccagctcttccatagctctgccca 241
Query: 1312 gcaccattggcctcctagcttcattattccacctgtcttcagctatgacgatggttttca 1371
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcaccgttggcctcctagcttcattattccacctgtcttcagctatgacgatggttttca 301
Query: 1372 gtaaaggcgtatgcacactcgtaaatatcaaaaagaaattctttggacatgaagtcaagg 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtaaaggcgtatgcacactcgtaaatatcaaaaagaaattctttggacatgaagtcaagg 361
Query: 1432 aatgcaaatctgattagagttaggtgacactagtcattagtgagtagaattagagtgttt 1491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aatgcaaatctgattagagttaggtgacactagtcattagtgagtagaattagagtgttt 421
Query: 1492 gaaattatcataattacgttttagatgaaagtagtgacgaagttcagcttatagggctaa 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaaattatcataattacgttttagatgaaagtagtgacgaagttcagcttatagggctaa 481
Query: 1552 gggctaaactcaatctatattagggttctggaggtctgaaaccgacgttcggaggttgta 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gggctaaactcaatctatattagggttctggaggtctgaaaccgacgttcggaggttgta 541
Query: 1612 aacgcgactttattttattttacttcttttgtacaaggcctagtcccactgcct----tg 1667
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 542 aacgcgactttattttattttacttcttttgtacaaggcctagtcccactgccttgtatg 601
Query: 1668 tatgtatatatattttgtttgataatttttttactcggacttaattaaaatttaaagtgg 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tatgtatatatattttgtttgataatttttttactcggacttaattaaaatttaaagtgg 661
Query: 1728 aaccaatcacaaaacagagatttatttaacaattatgattacaaaattattttctttatt 1787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aaccaatcacaaaacagagatttatttaacaattatgattacaaaattattttctttatt 721
Query: 1788 tgaagtatataaggaatgtaattaagtaattaaaaggccattagtcgatataacatcatg 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tgaagtatataaggaatgtaattaagtaattaaaaggccattagtcgatataacatcatg 781
Query: 1848 cgatgtgattttatcaaaaattatttccccttgttatcaatttgataaagaagaagtcag 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 cgatgtgattttatcaaaaattatttccccttgttatcaatttgataaagaagaagtcag 841
Query: 1908 aacgcttt-gagaatacttcggacgctaaaagaattattaat 1948
||| |||| |||||| ||||||||||||||||||||||||||
Sbjct: 842 aacactttagagaatgcttcggacgctaaaagaattattaat 883
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 258,327
Number of extensions: 6231
Number of successful extensions: 6231
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6229
Number of HSP's successfully gapped: 1
Length of query: 1948
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1931
Effective length of database: 8,119,229
Effective search space: 15678231199
Effective search space used: 15678231199
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)