BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14352 (UTR included)
(1792 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_218_C1 1675 0.0
>BF14_218_C1
Length = 889
Score = 1675 bits (845), Expect = 0.0
Identities = 878/887 (98%), Gaps = 4/887 (0%)
Strand = Plus / Plus
Query: 247 tggagtcgcgcgcgcacggccttacacagactataatggacacgataatgaatgcgacaa 306
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3 tggagtcgcgcgcgcacggccttacacagactataatggacacgat---gaatgcgacaa 59
Query: 307 tggacacatccatggctttgaacgaagaacaggggaacgcgttaagggccaagataataa 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tggacacatccatggctttgaacgaagaacaggggaacgcgttaagggccaagataataa 119
Query: 367 caatggtttccctcttcgccatatcgatggctgttggtatagcgcccatgttaatatcgg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 caatggtttccctcttcgccatatcgatggctgttggtatagcgcccatgttaatatcgg 179
Query: 427 tcaaatttggctggttcacacaatcagatggggaaatacgttccagcaaacttgtaatgg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tcaaatttggctggttcacacaatcagatggggaaatacgttccagcaaacttgtaatgg 239
Query: 487 gactgttgtctttcggcggaggggtcctttttgctactacattcatgcatttgttaccgg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gactgttgtctttcggcggaggggtcctttttgctactacattcatgcatttgttaccgg 299
Query: 547 aagttgcagaaaatattaaggaattacaagaaaccg-gtgttataccagagatacctttg 605
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 300 aagttgcagaaaatattaaggaattacaagaaaccgcgtgttataccagagatacctttg 359
Query: 606 tacctggcttcgctcgtcatgtgctgtgggttcttcatgatgtatttagttgaagagctt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tacctggcttcgctcgtcatgtgctgtgggttcttcatgatgtatttagttgaagagctt 419
Query: 666 gtccatgcgtacataaacagccaccagaacaaagacgccaataccagcttcacacgcgtc 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gtccatgcgtacataaacagccaccagaacaaagacgccaataccagcttcacacgcgtc 479
Query: 726 ttgagcatacgaagaaagagcaatgagacagtggaaaccaatgaaccagttacgaaaaac 785
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 480 ttgagcatacgaagaaagagcaatgagacagtggaaaccaatgaaccagctacgaaaaac 539
Query: 786 gtagaagccaattatggtgacaggcacttgcctctgagtggtgatgacacgactgtaaca 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gtagaagccaattatggtgacaggcacttgcctctgagtggtgatgacacgactgtaaca 599
Query: 846 gctttaaggggactgttgattgtgctagctttgtctatacacgagctgtttgaaggatta 905
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gctttaagaggactgttgattgtgctagctttgtctatacacgagctgtttgaaggatta 659
Query: 906 gcggttggtctggagtcatctgtgaggaatgtttggtatatgtttggtgcggtttccgct 965
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 660 gcggttggtctggagtcatctgtgaggaatgtttggtatatgtttggtgcggtttcagct 719
Query: 966 cacaaatatattatcgcgttctgcatcggagtcgagttattggcagctggcacgaagaga 1025
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 720 cacaaatatattatcgcgttctgcattggagtcgagttattggcagccggcacgaagaga 779
Query: 1026 tggttgtcagttgtctatgtttttacattttccttcgtgtcagctttggggatcgcagtt 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tggttgtcagttgtctatgtttttacattttccttcgtgtcagctttggggatcgcagtt 839
Query: 1086 gggatcctgctggtaggtggcgctggagcgactgcagccggtatatc 1132
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gggatcctgctggtaggtggcgctggagcgactgcagccggtatatc 886
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 279,709
Number of extensions: 18817
Number of successful extensions: 18817
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 18815
Number of HSP's successfully gapped: 1
Length of query: 1792
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1775
Effective length of database: 8,119,229
Effective search space: 14411631475
Effective search space used: 14411631475
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)