BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14355 (UTR included)
(1354 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3049_C1 993 0.0
>BF14_3049_C1
Length = 1359
Score = 993 bits (501), Expect = 0.0
Identities = 600/635 (94%), Gaps = 16/635 (2%)
Strand = Plus / Plus
Query: 721 ggaccctggtgaacggtcatcagaccctggtgttcgtcgtccataacgtggtggggtacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ggaccctggtgaacggtcatcagaccctggtgttcgtcgtccataacgtggtggggtacc 612
Query: 781 tgctgatgttggccgtcatgatctacaacgttcacctcatgctggccgtggtcttcggca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tgctgatgttggccgtcatgatctacaacgttcacctcatgctggccgtggtcttcggca 672
Query: 841 tgatgttgggttagacatgcgcactggaacctctatacttgaattaggattctaattatt 900
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgatgttgggttagacttgcgcactggaacctctatacttgaattaggattctaattatt 732
Query: 901 tacatacaattcaaaatgtatcatcacgacacgggttcgaaccgagagctcggggatatc 960
||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| |
Sbjct: 733 tacatacaattcaaaatgtatcatcacaagaagggttcgaaccgagagctcggggatacc 792
Query: 961 acatctcagctgtcttaacaaatgagctatcgtgctccaacaagagatcgtgaattaagt 1020
|||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 793 acatctcagctgtcctaacaaatgagctatcgtgctccaacaagagatcgtgtattaagg 852
Query: 1021 ctttgttattgtttgtaatagtagttttaatgcacactttctttaattataatgatttga 1080
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 853 cattgttattgtttgtaatagtagttttaatgcacacgttctttaattataatgatttga 912
Query: 1081 ttctcattttaagtatttcttcacactaataataaagctatgtgtgatatgactgacaac 1140
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 ttctcattttaagaattttttcacactaataataaagctatgtgtgatatgactgacaac 972
Query: 1141 ttaatatttctttatttatgtggtcttttaaatcaaatctttaagaatttatcaattgca 1200
|||||||| | ||||| ||||||||| |||||| ||||||||||||
Sbjct: 973 ttaatatt---------------ttttttatatcaaatctataagaagttatcaattgca 1017
Query: 1201 tgaagtgtacggacggttctcatt-aaaaaatatatatatgtaagctttaattttattat 1259
|||||||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||||
Sbjct: 1018 tgaagtgtacggacagttctcattaaaaaaatatttatatgtaagcttcaattttattat 1077
Query: 1260 attcgtaaattatcccacttccttcaggttacttcctgttcgggaccaagttaactcgcc 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 attcgtaaattatcccacttccttcaggttacttcctgttcgggaccaagttaactcgcc 1137
Query: 1320 tccagatgcaatgcttcagcaccaagcgcgtcgtc 1354
|||||||||||||||||||||||||||||||||||
Sbjct: 1138 tccagatgcaatgcttcagcaccaagcgcgtcgtc 1172
Score = 448 bits (226), Expect = e-125
Identities = 232/234 (99%)
Strand = Plus / Plus
Query: 488 agctgaagtcatgatgcacatgtggatgtggtttggctatgacctgggcgacttcctgtt 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 agctgaagtcatgatgcacatgtggatgtggtttggctatgacctgggcgacttcctgtt 289
Query: 548 ttctggtctggtcgtcaacacgaggtggtcgttcgctctcacctggatagtgctgttttt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttctggtctggtcgtcaacacgaggtggtcgttcgctctcacctggatagtgctgttttt 349
Query: 608 cgtggctctgctcttcgagggatcgaaggtatatctcgctcgtgttcagcgcgaggcact 667
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 350 cgtggctctgctcttcgagggatcgaaggtatatctcgctcgtgttcaacgcgaggcact 409
Query: 668 tcggaaattgcgtcctcacggctctgacgaaagacggaacttgttatgtgagcg 721
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 410 tcggaaattgcgtcctcacggctgtgacgaaagacggaacttgttatgtgagcg 463
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 169,166
Number of extensions: 4031
Number of successful extensions: 4031
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4030
Number of HSP's successfully gapped: 3
Length of query: 1354
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1337
Effective length of database: 8,119,229
Effective search space: 10855409173
Effective search space used: 10855409173
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)