BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14390 (UTR included)
(2233 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B2D09 1108 0.0
>BF01020B2D09
Length = 773
Score = 1108 bits (559), Expect = 0.0
Identities = 562/563 (99%)
Strand = Plus / Plus
Query: 488 gtgcgaggagaccatgtcttcaggtgacatgtgtgtatcggcggcccgagccggtccttc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gtgcgaggagaccatgtcttcaggtgacatgtgtgtatcggcggcccgagccggtccttc 270
Query: 548 ggcgagatggcatccctcctgcttcgtgtgcagcacctgccaggagctgctggtggacct 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ggcgagatggcatccctcctgcttcgtgtgcagcacctgccaggagctgctggtggacct 330
Query: 608 ggtgtacttctggaaagacggacgactatactgtggacggcatcacgctgaaacactaaa 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ggtgtacttctggaaagacggacgactatactgtggacggcatcacgctgaaacactaaa 390
Query: 668 gcccagatgttctgcctgcgatgagataatattggctgatgagtgcacggaagctgaggg 727
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 acccagatgttctgcctgcgatgagataatattggctgatgagtgcacggaagctgaggg 450
Query: 728 tcgagcgtggcatatgaaacacttcgcgtgtcaggaatgttcacggcaactgggcggaca 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tcgagcgtggcatatgaaacacttcgcgtgtcaggaatgttcacggcaactgggcggaca 510
Query: 788 gcggtacatcatgagggaagccaggccgtactgcctgccttgcttcgacaattgcttcgc 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gcggtacatcatgagggaagccaggccgtactgcctgccttgcttcgacaattgcttcgc 570
Query: 848 cgaatactgcgacgcctgcggagagcccatcggcgtagatcaaggtcagatgtctcatga 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cgaatactgcgacgcctgcggagagcccatcggcgtagatcaaggtcagatgtctcatga 630
Query: 908 gggccagcactggcacgccaccgagcggtgcttcgcatgtcatacgtgtagagccagtct 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gggccagcactggcacgccaccgagcggtgcttcgcatgtcatacgtgtagagccagtct 690
Query: 968 tctcgggcgtccgttcttacctcgcaagggagctatattttgttctatagcctgctccaa 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tctcgggcgtccgttcttacctcgcaagggagctatattttgttctatagcctgctccaa 750
Query: 1028 aggcgaaccaccaacgccgtcag 1050
|||||||||||||||||||||||
Sbjct: 751 aggcgaaccaccaacgccgtcag 773
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 229,779
Number of extensions: 4095
Number of successful extensions: 4095
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4095
Number of HSP's successfully gapped: 1
Length of query: 2233
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2216
Effective length of database: 8,119,229
Effective search space: 17992211464
Effective search space used: 17992211464
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)