BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14392 (UTR included)
(2812 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048B2C09 1560 0.0
BF01020A1H06 1342 0.0
>BF01048B2C09
Length = 798
Score = 1560 bits (787), Expect = 0.0
Identities = 787/787 (100%)
Strand = Plus / Plus
Query: 901 caaagtcttcttcaagtacaaatccttccccgacactacaatgcaaggatcttcacgaat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 caaagtcttcttcaagtacaaatccttccccgacactacaatgcaaggatcttcacgaat 71
Query: 961 atttgaaaagtcgctcgcctcagttcctcgaaaccttatacaattatcccacaatatgct 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atttgaaaagtcgctcgcctcagttcctcgaaaccttatacaattatcccacaatatgct 131
Query: 1021 tagcggtatatcgagaactgcctgagttagcccgacattttgtgatccgattgctgtttg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tagcggtatatcgagaactgcctgagttagcccgacattttgtgatccgattgctgtttg 191
Query: 1081 tagaacaacctgtccctcaagcagtggttgcttcttgggtcacacagactcatgccaaag 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tagaacaacctgtccctcaagcagtggttgcttcttgggtcacacagactcatgccaaag 251
Query: 1141 agcaacacaaagcttgcgaggctctgtcggagctgtctgtgtggcaggaggctcctatcc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agcaacacaaagcttgcgaggctctgtcggagctgtctgtgtggcaggaggctcctatcc 311
Query: 1201 ctggaggtctgccgggatggatgctttcacagtcttttaagaagaatctgaaagttgctc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctggaggtctgccgggatggatgctttcacagtcttttaagaagaatctgaaagttgctc 371
Query: 1261 ttcttggaggcggtcgtccatggagcatgtcatcctctctggaaccggatggcaaggctc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttcttggaggcggtcgtccatggagcatgtcatcctctctggaaccggatggcaaggctc 431
Query: 1321 gtgatgtgtcattcctggacgcgtacgctcttgaacgctgggaatgtgttctgcattaca 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gtgatgtgtcattcctggacgcgtacgctcttgaacgctgggaatgtgttctgcattaca 491
Query: 1381 tggtgggatcaacacagaccgaggggatcagtgctgatgctgtcaggatactgctacagg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tggtgggatcaacacagaccgaggggatcagtgctgatgctgtcaggatactgctacagg 551
Query: 1441 ccggactcatgaacagagatgcagaagatggcacagctgttataaccagagctggattcc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ccggactcatgaacagagatgcagaagatggcacagctgttataaccagagctggattcc 611
Query: 1501 agtttctgctcctcagcacagctaaacaggtatggctgtttctccaacactacctgcaca 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agtttctgctcctcagcacagctaaacaggtatggctgtttctccaacactacctgcaca 671
Query: 1561 cggcggaaaaacgcagtctcagcgccgcggagtgcctcgccttcctgtaccagctcagct 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 cggcggaaaaacgcagtctcagcgccgcggagtgcctcgccttcctgtaccagctcagct 731
Query: 1621 tcagcacactcggcaaggattacagcacggagggtatgagtaacaacatgctggtgttcc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tcagcacactcggcaaggattacagcacggagggtatgagtaacaacatgctggtgttcc 791
Query: 1681 tccagca 1687
|||||||
Sbjct: 792 tccagca 798
>BF01020A1H06
Length = 677
Score = 1342 bits (677), Expect = 0.0
Identities = 677/677 (100%)
Strand = Plus / Minus
Query: 28 cgctgcggcactcgcagttgtagatggggctgtccgagatgacgaccgtgaagcacgcgc 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cgctgcggcactcgcagttgtagatggggctgtccgagatgacgaccgtgaagcacgcgc 618
Query: 88 cgccgttcaggcagtagtactccgagtagtcgggctcgcacttgaaggtggggaaggtca 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cgccgttcaggcagtagtactccgagtagtcgggctcgcacttgaaggtggggaaggtca 558
Query: 148 cgttcaggcgcggctgcggctgcggctgcggcggcgggcgctgcggccttgcgggccgcg 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cgttcaggcgcggctgcggctgcggctgcggcggcgggcgctgcggccttgcgggccgcg 498
Query: 208 ccggccgcttcgagatcgagctggagcaggcgcccaccagcgcccaagccgccgacacca 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ccggccgcttcgagatcgagctggagcaggcgcccaccagcgcccaagccgccgacacca 438
Query: 268 ccgccagccacactaccaacgactgcattgtctgcacgcgctggctccggacgctcgccg 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ccgccagccacactaccaacgactgcattgtctgcacgcgctggctccggacgctcgccg 378
Query: 328 ctcgcggtacgtgcacgattttgacattggacggtgacttatacgaaatccgagaggcga 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ctcgcggtacgtgcacgattttgacattggacggtgacttatacgaaatccgagaggcga 318
Query: 388 tgacatgaccgctttcgaatttcgaactcgaacccttcgctcgcatccgtgtcggcggtc 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgacatgaccgctttcgaatttcgaactcgaacccttcgctcgcatccgtgtcggcggtc 258
Query: 448 cgcccagacatgtttcctgtgtcaactttttttatgtcgacgatcactcgctcatgacgg 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cgcccagacatgtttcctgtgtcaactttttttatgtcgacgatcactcgctcatgacgg 198
Query: 508 aggcgcggtttctacgagcgcccgagatctcacatcgatccctccgcgggcatatcgaaa 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 aggcgcggtttctacgagcgcccgagatctcacatcgatccctccgcgggcatatcgaaa 138
Query: 568 gcgaaacactagatcgaaccgagtcgtacactgttttcgtgtttctaagacgattattca 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gcgaaacactagatcgaaccgagtcgtacactgttttcgtgtttctaagacgattattca 78
Query: 628 cggagcacatatacacaatgtcccgttccgaaggatatacacaaaatggtgctgagcgaa 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 cggagcacatatacacaatgtcccgttccgaaggatatacacaaaatggtgctgagcgaa 18
Query: 688 acggaatagcactgtac 704
|||||||||||||||||
Sbjct: 17 acggaatagcactgtac 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 196,991
Number of extensions: 3310
Number of successful extensions: 3310
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3306
Number of HSP's successfully gapped: 2
Length of query: 2812
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2795
Effective length of database: 8,119,229
Effective search space: 22693245055
Effective search space used: 22693245055
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)