BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14396 (UTR included)
(1585 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_4_C1 1201 0.0
>BF14_4_C1
Length = 651
Score = 1201 bits (606), Expect = 0.0
Identities = 615/618 (99%)
Strand = Plus / Plus
Query: 490 agctcgccaccatggtgaacaaccgtgtgccgtcggtcttttcgaagacgtacgttactc 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 agctcgccaccatggtgaacaaccgtgtgccgtcggtcttttcgaagacgtacgttactc 72
Query: 550 cgcgtcgtccgttcgagaaagcgcgtctcgatcaggagttgaagatcatcggtgaatatg 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cgcgtcgtccgttcgagaaagcgcgtctcgatcaggagttgaagatcatcggtgaatatg 132
Query: 610 gtctccgcaacaagcgtgaggtgtggagggtcaagtacacgctcgcccgcatccgtaagg 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gtctccgcaacaagcgtgaggtgtggagggtcaagtacacgctcgcccgcatccgtaagg 192
Query: 670 ctgcccgtgagcttctcaccctggaggagaaggaccccaagcgtctgtttgaaggtaacg 729
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ctgcccgtgagctgctcaccctggaggagaaggaccccaagcgtctgtttgaaggtaacg 252
Query: 730 cactcctccgtcgtctggtgaggatcggtgtattggatgagaagcagatgaagctggatt 789
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 253 cactcctccgtcgtctggtgaggatcggtgtattagatgagaagcagatgaagctggatt 312
Query: 790 acgtcctgggtctcaagatcgaggacttcttggagcgtcgtctccagacccaagtgttca 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 acgtcctgggtctcaagatcgaggacttcttggagcgtcgtctccagacccaagtgttca 372
Query: 850 aagccggtctggccaagtccatccatcacgctagaattctcatccgtcaaagacacatcc 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aagccggtctggccaagtccatccatcacgctagaattctcatccgtcaaagacacatcc 432
Query: 910 gtgtccgtaaacaaatagtgaacatcccatcgttcattgtccgtctggactctggcaagc 969
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 433 gtgtccgtaaacaaatagtgaacatcccatcattcattgtccgtctggactctggcaagc 492
Query: 970 acattgacttctctctgaagtcaccattcggtggcggcagacctggtcgtgtcaagagga 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 acattgacttctctctgaagtcaccattcggtggcggcagacctggtcgtgtcaagagga 552
Query: 1030 agaacctccgcaagggtcaaggcggaggagccaccaatgacgaggaagaggactagacaa 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agaacctccgcaagggtcaaggcggaggagccaccaatgacgaggaagaggactagacaa 612
Query: 1090 taaacacttgtactataa 1107
||||||||||||||||||
Sbjct: 613 taaacacttgtactataa 630
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 169,805
Number of extensions: 3305
Number of successful extensions: 3305
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3305
Number of HSP's successfully gapped: 1
Length of query: 1585
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1568
Effective length of database: 8,119,229
Effective search space: 12730951072
Effective search space used: 12730951072
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)