BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14404 (UTR included)
(1651 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_35_C1 1128 0.0
>BF14_35_C1
Length = 1450
Score = 1128 bits (569), Expect = 0.0
Identities = 609/622 (97%), Gaps = 4/622 (0%)
Strand = Plus / Plus
Query: 1030 agggcacgggtgtgaggcgcgcttggaatcggcttttatatacactatggtactttaatt 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 agggcacgggtgtgaggcgcgcttggaatcggcttttatatacactatggtactttaatt 212
Query: 1090 atgaacgtaagacgcgcgaacaacacatacagacggaggaacggttccaggcgctgccgt 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 atgaacgtaagacgcgcgaacaacacatacagacggaggaacggttccaggcgctgccgt 272
Query: 1150 gacgacgcaccgggtgtttacaggagagagagagagagagagatagagagatagagagga 1209
||||||||||||||||||||||||||| |||||||||||| |||||| | ||||
Sbjct: 273 gacgacgcaccgggtgtttacaggaga----gagagagagagagagagagtgatagagag 328
Query: 1210 gagagagagacaatacacagacagacatacaatggtctaagagagtgtcaattgaagaca 1269
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 329 gagagagagacaatacacagacagacatacaatggtctaagggagtgtcaattgaagaca 388
Query: 1270 gaaaaaataataactcggatcatgaaacgagtaatggttttgaatatataaccaatgtat 1329
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 389 gaaaaaataataactcggatcttgaaacgagtaatggttttgaatatataaccaaggtat 448
Query: 1330 gtacgtctgtgtgtcggagataaggagtttttatataggtagcgcacatctgtgatagaa 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gtacgtctgtgtgtcggagataaggagtttttatataggtagcgcacatctgtgatagaa 508
Query: 1390 tcggcagccgcaggcgttagctcatatataattggcatggctaaaattttttactaagac 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tcggcagccgcaggcgttagctcatatataattggcatggctaaaattttttactaagac 568
Query: 1450 tgactcagggttttattttccccagacgtccgtctataagtcggacggctatggtctata 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tgactcagggttttattttccccagacgtccgtctataagtcggacggctatggtctata 628
Query: 1510 aggcgatctattgttaactctactcatactgatttgttattggcgattcaaaattgacgt 1569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aggcgatctattgttaactctactcatactgatttgttattggcgattcaaaattgacgt 688
Query: 1570 ggcattgtactactacgagtagttttatatacttatatattgtatgcacacacatgtatg 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ggcattgtactactacgagtagttttatatacttatatattgtatgcacacacatgtatg 748
Query: 1630 taaataaatatttatatgtata 1651
||||||||||||||||||||||
Sbjct: 749 taaataaatatttatatgtata 770
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,662
Number of extensions: 5946
Number of successful extensions: 5946
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5929
Number of HSP's successfully gapped: 1
Length of query: 1651
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1634
Effective length of database: 8,119,229
Effective search space: 13266820186
Effective search space used: 13266820186
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)