BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14409 (UTR included)
(3784 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048B2E08 1275 0.0
>BF01048B2E08
Length = 704
Score = 1275 bits (643), Expect = 0.0
Identities = 688/704 (97%)
Strand = Plus / Plus
Query: 2284 gacctccgggtccatcaggtcctcctggagtctctatcatcggtcctaaaggagaacctg 2343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacctccgggtccatcaggtcctcctggagtctctatcatcggtcctaaaggagaacctg 60
Query: 2344 gtggattagtaactaagaaatcattttttgcattcaatgacattcatcatgagagcacag 2403
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtggtctagtaactaagaaatcattttttgcattcaatgacattcatcatgagagcacag 120
Query: 2404 atgaagacgatgatttttatacagcagcgactgtcattttcaaaacaactaccggtcttc 2463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgaagacgatgatttttatacagcagcgactgtcattttcaaaacaactaccggtcttc 180
Query: 2464 ttaagagaactactgacacccctctggggacgctggcatatatattacaagagaaaatat 2523
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 ttaagagaactactgacacccctctggggacgctggcatatattttacaagagaaaatat 240
Query: 2524 tattaatgcgggttgaaaatggatggcaatacgttgtgatgggttcttttttgcaaacaa 2583
||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 241 tattaatgcgggttgaaaacggatggcaatacgttgtgatggggtctttcttgcaaacaa 300
Query: 2584 gggaatcacataccagcacaacattcagaccaacgtactattcatcaactccatcaagtc 2643
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggaatcacataccagcacaacattcagaccaacgtactattcatcaactccatcaagtt 360
Query: 2644 caccctcttcagatgaaacgacagagaataatgaagataattacatacgtttggtcgcct 2703
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caccctcttcagacgaaatgacagagaataatgaagataattacatacgtttggtcgcct 420
Query: 2704 taaaccaagcatatgcaggaaatatacttatggcaaacaatagaactgggcgtaatgctg 2763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taaaccaagcatatgcaggaaatatacttatggcaaacaatagaactgggcgtaatgctg 480
Query: 2764 ctgaccaggaatgttaccgacaagcttatatacataattttaaaagcacttttgcagcct 2823
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgaccaggaatgttaccgacgagcttatatacataattttaaaagcacttttgcagcct 540
Query: 2824 tcctagctactagggttgaagatctaagatttattgtaaaaagaaaacgagacagatatg 2883
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcctagctactagagttgaagatctaagatttattgtaaaaagaaaacgagacagatatg 600
Query: 2884 ttccggtagtcaacttgtacggacaagttcttttcgattcctgggcgagcatgtttaatg 2943
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 601 ttccggtagtcaacttgtacggacaagttcttttnnnttcctgggcgagcatgtttaatg 660
Query: 2944 gttcaggagcactgtttgcaaaatcaagtatttacagctttaat 2987
|||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 661 gttcgggagcactgtttgcaaaatcaagtatttacagccttaat 704
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 504,039
Number of extensions: 12499
Number of successful extensions: 12499
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12499
Number of HSP's successfully gapped: 1
Length of query: 3784
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3766
Effective length of database: 8,109,745
Effective search space: 30541299670
Effective search space used: 30541299670
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)