BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14420 (UTR included)
(1597 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B2H08 997 0.0
BF14_619_C1 105 2e-22
BF14_3257_C1 96 2e-19
>BF01050B2H08
Length = 716
Score = 997 bits (503), Expect = 0.0
Identities = 511/514 (99%)
Strand = Plus / Plus
Query: 429 cagataatcaatatggagttgctagaacttttaaaacagtatggcgtcggtcgtcggaaa 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cagataatcaatatggagttgctagaacttttaaaacagtatggcgtcggtcgtcggaaa 262
Query: 489 gttgatgacgtgatgttcaataaagacaaaccaccttcgcgactcggcgtctatgacgta 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gttgatgacgtgatgttcaataaagacaaaccaccttcgcgactcggcgtctatgacgta 322
Query: 549 gacgatgaagaattatgtcattctgttatacaaacatcttgcgctgttcccggatgcaag 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gacgatgaagaattatgtcattctgttatacaaacatcttgcgctgttcccggatgcaag 382
Query: 609 ttttctacggactcgctgctagacttcgagaatcattacaatgcgactcacagatactcg 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttttctacggactcgctgctagacttcgagaatcattacaatgcgactcacagatactcg 442
Query: 669 tgtagccagtgcaagaaggttttgccgtcaccacatctgctagaccttcatatacaagag 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgtagccagtgcaagaaggttttgccgtcaccacatctgctagaccttcatatacaagag 502
Query: 729 aaacacgattcgttcttcgctgttatggcgcttaaaaagccatcgtactgctgttatatt 788
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 503 aaacacgattcgttcttcgctgttatggcgcttaaaaagccgtcgtactgctgttatatt 562
Query: 789 gaagaatgcaaggaaaaattcataaatgcggaagatagaatggaccattgtacgaaagtg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gaagaatgcaaggaaaaattcataaatgcggaagatagaatggaccattgtacgaaagtg 622
Query: 849 cataaattacctaaagattttcgatatcaccagaagtcgcagaaaaaaaataaaaaagca 908
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cataaattacccaaagattttcgatatcaccagaagtcgcagaaaaaaaataaaaaagca 682
Query: 909 gacaatgctatggtcatagacaatgaacagacga 942
||| ||||||||||||||||||||||||||||||
Sbjct: 683 gacnatgctatggtcatagacaatgaacagacga 716
>BF14_619_C1
Length = 793
Score = 105 bits (53), Expect = 2e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 10 tttaattcgggcccgaagggcaggtcgggg-tatacgcccgtcccaagggtgcctctaag 68
|||||||| |||||||||||| | ||| | |||||||||||||||||||||||||||||
Sbjct: 199 tttaattcaggcccgaagggcccgacggagatatacgcccgtcccaagggtgcctctaag 140
Query: 69 aagccggacctcggctttggacgtcgttggagtggag 105
| ||||||||||||||| | ||||||||| |||||||
Sbjct: 139 aggccggacctcggcttagtacgtcgttgaagtggag 103
>BF14_3257_C1
Length = 1221
Score = 95.6 bits (48), Expect = 2e-19
Identities = 78/88 (88%)
Strand = Plus / Minus
Query: 189 ccgctggtggtgatgcgggtgacacctcataatttcaactaccctcaaatattagtcatt 248
|||| |||||| ||||||||||||||| ||| |||||||||||||||| ||||||| |||
Sbjct: 1220 ccgcaggtggttatgcgggtgacacctaatattttcaactaccctcaattattagttatt 1161
Query: 249 aaaataataagaaatgcgccgatatata 276
|||| |||| || ||||||||||||||
Sbjct: 1160 gaaattataacaattgcgccgatatata 1133
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 289,086
Number of extensions: 11612
Number of successful extensions: 11612
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 11611
Number of HSP's successfully gapped: 3
Length of query: 1597
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1580
Effective length of database: 8,119,229
Effective search space: 12828381820
Effective search space used: 12828381820
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)