BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14436 (UTR included)
(1987 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_482_C1 155 3e-37
>BF14_482_C1
Length = 1827
Score = 155 bits (78), Expect = 3e-37
Identities = 210/254 (82%)
Strand = Plus / Plus
Query: 843 aagtatccggagaatttcttcctcttgagaggcaatcatgaatgcgcaagcatcaatcga 902
|||||||| ||||||||||| || | |||||||||| |||||||| ||||| |||||
Sbjct: 353 aagtatccagagaatttctttctgcttcgaggcaatcacgaatgcgcgagcataaatcgt 412
Query: 903 atttatggattctacgacgagtgcaagcggaggtataatatcaagttatggaaaacattc 962
|||||||| ||||| || || ||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 413 atttatggtttctatgatgaatgcaaacgcaggtataacataaagttgtggaagacattc 472
Query: 963 acagactgtttcaactgtcttcctgttgccgctatagttgatgagaagatcttttgctgt 1022
|||||||||||||| ||| | || | || ||||| ||||||||||||| || || |||
Sbjct: 473 acagactgtttcaattgtttgccgatagctgctatcattgatgagaagatattctgttgt 532
Query: 1023 cacggaggtctgtcacctgacctccaggctatggagcagatcaggcggatcatgcgccca 1082
|| |||||||| || |||||||| |||| |||||| |||||||| |||| ||| | ||
Sbjct: 533 catggaggtctctcgcctgaccttcagggtatggaacagatcagaaggataatgagaccc 592
Query: 1083 actgatgtacccga 1096
||||||||||||||
Sbjct: 593 actgatgtacccga 606
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/155 (80%)
Strand = Plus / Plus
Query: 1245 gcccaccaggtggttgaggacggatacgagttcttcgccaagcggcagctggtcactttg 1304
||||| ||||| ||||| || || || ||||||||||||||||| ||||||||||| |
Sbjct: 755 gcccatcaggttgttgaagatggttatgagttcttcgccaagcgtcagctggtcacacta 814
Query: 1305 ttctcagcgccgaattactgcggcgagtttgacaacgccggcgccctaatgtcggtggac 1364
||||| || || ||||| ||||| |||||||| || || || | | | ||||| || ||
Sbjct: 815 ttctcggccccaaattattgcggggagtttgataatgctggtggcatgatgtccgttgat 874
Query: 1365 gagacgctcatgtgctcgttccagatcttgaagcc 1399
|| ||||| |||||||| |||||||| || |||||
Sbjct: 875 gaaacgctaatgtgctccttccagatattaaagcc 909
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,567
Number of extensions: 8537
Number of successful extensions: 8537
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8535
Number of HSP's successfully gapped: 2
Length of query: 1987
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1970
Effective length of database: 8,119,229
Effective search space: 15994881130
Effective search space used: 15994881130
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)