BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14442 (UTR included)
(2419 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021A2D09 396 e-110
>BF01021A2D09
Length = 754
Score = 396 bits (200), Expect = e-110
Identities = 373/428 (87%), Gaps = 2/428 (0%)
Strand = Plus / Plus
Query: 551 ttattattttgttgtgagaagacttaattattggaaaagcagaaatgtgccatgtttgaa 610
|||||||||| |||| | ||||||||||||||||||| ||| |||||||||| | |||
Sbjct: 49 ttattattttattgtaaagagacttaattattggaaaaacaggaatgtgccatatccgaa 108
Query: 611 gccactaccgtttttcggaaattacaaagactatatcttactgcaaaagaaattcttgtt 670
||||||| |||| ||||||||||| || ||||||| || | |||||| || | ||
Sbjct: 109 gccactagtacttttgggaaattacaaggatcatatcttcctacgaaagaatttaatttt 168
Query: 671 tgttactgatgagatatgcaaacagtttcctaatgagccctacattggtactctttacgg 730
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 169 tgttactgatgagatatgcaaacagtttcctaatgagtcctacattggtactctttacgg 228
Query: 731 tacggaaccaacgcttatagtcaaggatcctaaattactgaaattaataacgacacagga 790
||| |||| |||||||||||||||||||||||| ||||| |||||||||| |||| ||||
Sbjct: 229 taccgaactaacgcttatagtcaaggatcctaatttactcaaattaataatgacaaagga 288
Query: 791 tttctacttcttcagcggaagagaaattacagattacaatcataag-gaaacggtgacca 849
|||||||| ||||| || |||||| |||| | ||||| || || ||| | || |
Sbjct: 289 tttctactacttcaatgggagagaagttactcagtacaa-caccagagaagaacttacaa 347
Query: 850 acaacatgttcttccacggtggagataaatggaaagtcgtgagacaaaatctaacaccac 909
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 348 acaacatgttcttccacagtggtgataaatggaaagtcgtgagacaaaatctaacaccac 407
Query: 910 tctttacgtcaatgaaaatgaagaaaatgttccatttgattaaaaatattggtgattcat 969
| ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 408 tttttacctcaatgaaaatgaagaaaatgttccatttggttaaagatattggtgattcat 467
Query: 970 ttgaaaaa 977
||||||||
Sbjct: 468 ttgaaaaa 475
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 329,783
Number of extensions: 6985
Number of successful extensions: 6985
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6984
Number of HSP's successfully gapped: 2
Length of query: 2419
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2402
Effective length of database: 8,119,229
Effective search space: 19502388058
Effective search space used: 19502388058
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)