BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14444 (UTR included)
(1576 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A1C04 1503 0.0
>BF01020A1C04
Length = 777
Score = 1503 bits (758), Expect = 0.0
Identities = 774/778 (99%), Gaps = 1/778 (0%)
Strand = Plus / Plus
Query: 392 acttgtacgaaaacattgaggttatggttttacatagatccggatgtcatataaattttg 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttgtacgaaaacattgaggttatggttttacatagatccggatgtcatataaattttg 60
Query: 452 aaacattgaaatcattaactaacgaaattaaatattataaaagaacaatatgactgaata 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaacattgaaatcattaactaacgaaattaaatattataaaagaacaatatgactgaata 120
Query: 512 taggaaacctcccgtcgaccccgatttaattaaattctcagagaaagatgactacgactc 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taggaaacctcccgtcgaccccgatttaattaaattctcagagaaagatgactacgactc 180
Query: 572 ccttgcaaaatatttagtcggtaacatataccgatatcgtgaaaacataatcatacccag 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccttgcaaaatatttagtcggtaacatataccgatatcgtgaaaacataatcatacccag 240
Query: 632 agtattgggtcctgttatcattaaaacaaatgaagagaagatgatcgaggccactgttga 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtattgggtcctgttatcattaaaacaaatgaagagaagatgatcgaggccactgttga 300
Query: 692 aagttgcccatttaaatctttcaccagttgtgttataggttatggtttgggagctgctgt 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagttgcccatttaaatctttcaccagttgtgttataggttatggtttgggagctgctgt 360
Query: 752 aggcttattcacttcatcgcttatgcctaatatgagtgacccaatggcacaacaaaatca 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggcttattcacttcatcgcttatgcctaatatgagtgacccaatggcacaacaaaatca 420
Query: 812 aacagcgagggaaatcttgagagaaatgaaaaactcaatgttgagctacgccaagaactt 871
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacagcgagggagatcttgagagaaatgaaaaactcaatgttgagctacgccaagaactt 480
Query: 872 tgctatactcggtgcagtcttttccggagtcgaatgttgtatagaaagcgcaaggggcaa 931
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 481 tgctatactcggtgcagtcttttccggggtcgaatgttgtatagaaagcgcaaggggcaa 540
Query: 932 atcagattggaagaatgggacatacgctggtggcgttaccggtgggcttataggtttaag 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atcagattggaagaatgggacatacgctggtggcgttaccggtgggcttataggtttaag 600
Query: 992 aggtggtttaaaagctggtgtatttggtgctgcaggttttgctgcattttcaactgtcat 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aggtggtttaaaagctggtgtatttggtgctgcaggttttgctgcattttcaactgtcat 660
Query: 1052 tgattactatatgcatcaacgctagtaattaataaattattgatactttaatttaatgtt 1111
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 661 tgattactatatgcatcaacgctagtaattaataaatta-cgatactttaatttaatgtt 719
Query: 1112 agttaataaatgtagaagtgttatgtttaattcttttgtgtccaataatcaattagct 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 agttaataaatgtagaagtgttatgtttaattcttttgtgtccaataatcaattagct 777
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 295,198
Number of extensions: 21945
Number of successful extensions: 21945
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 21942
Number of HSP's successfully gapped: 1
Length of query: 1576
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1559
Effective length of database: 8,119,229
Effective search space: 12657878011
Effective search space used: 12657878011
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)