BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14453 (UTR included)
(2551 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017B1B01 1380 0.0
>BF01017B1B01
Length = 716
Score = 1380 bits (696), Expect = 0.0
Identities = 711/716 (99%)
Strand = Plus / Plus
Query: 450 gaatatgtagaagaggttgtgtgtaaagtgaatgacatcaatgaaaatgaaatgaaggta 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatatgtagaagaggttgtgtgtaaagtgaatgacatcaatgaaaatgaaatgaaggta 60
Query: 510 ttcgatattggagaggatgggaaagtattggtagtgaaacagaagggtgagatcaatgct 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcgatattggagaggatgggaaagtattggtagtgaaacagaagggtgagatcaatgct 120
Query: 570 ttgggtactaagtgtactcattatggggctccattatcccagggggctcttggtgacggg 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgggtactaagtgtactcattatggggctccattatcccagggggctcttggtgacggg 180
Query: 630 agaattaggtgccaatggcatggcgcttgcttcaacttgaagactggagatattgaagat 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaattaggtgccaatggcatggcgcttgcttcaacttgaagactggagatattgaagat 240
Query: 690 ttccccggttttgattcattgccctgttatcaagttacaatcactaaaaaaggagaggtc 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttccccggttttgattcattgccctgttatcaagttacaatcactaaaaaaggagaggtc 300
Query: 750 aaggtaagggcaaagaagagtgatttgaagaccaacaagcggacaaaggaattggtagag 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggtaagggcaaagaagagtgatttgaagaccaacaagcggacaaaggaattggtagag 360
Query: 810 gtgacggaattggaggatacctccgtggtgatagtgggtggtggtccatcgggtggcacc 869
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 361 gtgacggaattggaggatacctccgtggtgatagtgggtggtggtccatcgggcggcacc 420
Query: 870 tgcgcagaaacactgaggagcgagggcttcaaaggaagaatcacgcttatatgcaaagag 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcgcagaaacactgaggagcgagggcttcaaaggaagaatcacgcttatatgcaaagag 480
Query: 930 aaatatttgccgtatgacagagttaaagtctcgaaggtaagtcagatcccggaggtatct 989
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaatacttgccgtatgacagagttaaagtctcgaaggtaagtcagatcccggaggtatct 540
Query: 990 aaactagcggcccgcaccgacgattactacagcaaagcgaagatcgatgtccttaaaaac 1049
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaactagaggcccgcaccgacgattactacagcaaagcgaagatcgatgtccttaaaaac 600
Query: 1050 aatgaagtaactaaagttaatacagaggaaaactatgtccaatgtaaagatggtacaaaa 1109
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 601 aatgaagtaactaaagttaatacagaggaaaattatgtccaatgtaaagatggtacaaaa 660
Query: 1110 gttccctataaatacttatatctcgccagcgggaccaaagcccgtgtcccggacgt 1165
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 661 gttccctataaatacttatatctcgccagcgggaccaaagcccgtgtgccggacgt 716
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 330,254
Number of extensions: 6830
Number of successful extensions: 6830
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6830
Number of HSP's successfully gapped: 1
Length of query: 2551
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2534
Effective length of database: 8,119,229
Effective search space: 20574126286
Effective search space used: 20574126286
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)