BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14472 (UTR included)
(3772 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052B1B09 1513 0.0
>BF01052B1B09
Length = 802
Score = 1513 bits (763), Expect = 0.0
Identities = 794/803 (98%), Gaps = 1/803 (0%)
Strand = Plus / Plus
Query: 1590 tatgacgtgtacagcgacgaggagggaaaagatgataagagtgatgagaaacttgagacg 1649
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 1 tatgacgtgtacagcgacgaggagggaaaagacgataagagtgacgagaaacttgagacg 60
Query: 1650 gaacagttctctagcgacaaaatgcacgtgttcagagaagactctggacagaggaagaac 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaacagttctctagcgacaaaatgcacgtgttcagagaagactctggacagaggaagaac 120
Query: 1710 aagtggtttaaaaatttgaaactacttaaaagtactgagaagctggatgataaaataaca 1769
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 aagtggtttaaaaatttgaaactacttaaaagtactgagaagctggatgacaaaataaca 180
Query: 1770 gctatagagagtaacgaaaaacatagagacattaaggatccgtttgatcccttgggtgag 1829
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctatagagagtaatgaaaaacatagagacattaaggatccgtttgatcccttgggtgag 240
Query: 1830 aaacatagttctatagagcgatatcaagatatggcgaaactgatagaggatagattcggt 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaacatagttctatagagcgatatcaagatatggcgaaactgatagaggatagattcggt 300
Query: 1890 gtctttaggaaaaacgatggaacggcggaaaaaagccattcatacaaaagtctcacaaca 1949
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtctttaggaaaaacgatggaacggcggaaaaaagccattcatacaaaagtctcacaacg 360
Query: 1950 tcatcatcggagatgggaacgagtcaatgcagttcgagtcataaaaaggttgtgttgacg 2009
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 tcatcatcggagatgggaacgagtcaatgtagttcgagtcataaaaaggttgtgttgacg 420
Query: 2010 aaatccgtatcagtacagacggggatgccggacagttcatacacggaggaagaagatagc 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaatccgtatcagtacagacggggatgccggacagttcatacacggaggaagaagatagc 480
Query: 2070 ggaattaatatgaaacatggacgaaagaacctcagtgtcgaccaaataaactactgcggg 2129
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaattaatatgaaacatggacggaagaacctcagtgtcgaccaaataaactactgcggg 540
Query: 2130 tccatggagagcgacacgagctcggggagaaaattaaaatccctcgacgaaaatatgctg 2189
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctatggagagcgacacgagctcggggagaaaattaaaatccctcgacgaaaatatgctg 600
Query: 2190 aaaaaatcttcagcttccaaatcgtcatcaaatctggagaggaggcagaggatacagcca 2249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaaaatcttcagcttccaaatcgtcatcaaatctggagaggaggcagaggatacagcca 660
Query: 2250 gaccttataccagaaaaagcaatagtgaaatctgaatcatacaaccaaatacaaagctgt 2309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaccttataccagaaaaagcaatagtgaaatctgaatcatacaaccaaatacaaagctgt 720
Query: 2310 gaagatataaatatgtttggggccgggtctctgtacaacgataatgacttcgagattaat 2369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 721 gaagatataaatatgtttggggccgggtctctgtacaacgataatgacttcgagatt-at 779
Query: 2370 tacaagcaacattcatttatcac 2392
|||||||||||||||||||||||
Sbjct: 780 tacaagcaacattcatttatcac 802
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 416,242
Number of extensions: 19509
Number of successful extensions: 19509
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19508
Number of HSP's successfully gapped: 1
Length of query: 3772
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3754
Effective length of database: 8,109,745
Effective search space: 30443982730
Effective search space used: 30443982730
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)