BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14500 (UTR included)
(2515 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055A2H10 1362 0.0
>BF01055A2H10
Length = 737
Score = 1362 bits (687), Expect = 0.0
Identities = 717/727 (98%)
Strand = Plus / Plus
Query: 1286 tttgccgttgatagtgaattccgacggaacaaaactcagtaagagacaaaatgatgtcaa 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tttgccgttgatagtgaattccgacggaacaaaactcagtaagagacaaaatgatgtcaa 70
Query: 1346 agttgaagactacaggaataaaggaatatatcctttagcattagtgaattacataacact 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 agttgaagactacaggaataaaggaatatatcctttagcattagtgaattacataacact 130
Query: 1406 atccgggggcgggtttaaccacgtggtgggagagggggtcagactcaagactattgagga 1465
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 131 atccgggggcgggtttaaccacgtggtgggggagggggtcagactcaagactattgagga 190
Query: 1466 actgtctgctgagtttcaaattgataaggtggcgtcccatccgagccgccttaactcaga 1525
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 191 actgtctgctgagtttcaaatcgataaggtggcgtcccatccgagccgccttaactcaga 250
Query: 1526 gatactcgaagaatgtaaccgcttggagataaagagacgattaagagatgacaaactagc 1585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gatactcgaagaatgtaaccgcttggagataaagagacgattaagagatgacaaactagc 310
Query: 1586 gaacgaaatgatttacactctgagaaatattataacggaaaagtatccaaatgagcatct 1645
|||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 311 gaacgaaatgatttacggtctgagaaatattataacggaaaagtatccaaatgaacatct 370
Query: 1646 taatgtttctgaagttcacatcaagagtgttttgaattgggcaacctcgagaatatccag 1705
|||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 371 taatgtctctgaagatcacatcatgagtgttttgaattgggcaacctcgagaatatccag 430
Query: 1706 gatagaggatttagttggcaaaaaattcggcttcctctggattctccccgcagccaaaga 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gatagaggatttagttggcaaaaaattcggcttcctctggattctccccgcagccaaaga 490
Query: 1766 gttagaagtgaacaagaatcttctagtaggattgcttgaaagtctacaaggtttggaacg 1825
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 491 gttagaagtcaacaagaatcttctagaaggattgcttgaaagtctacaaggtttggaacg 550
Query: 1826 ttttgagcaggacttgataaaggaaaatttgagggttttctcggaacagaagaaagtcaa 1885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ttttgagcaggacttgataaaggaaaatttgagggttttctcggaacagaagaaagtcaa 610
Query: 1886 gtttccggttctgatgaagtcgttgaggtcagtgctcagcggtctggacgaagggccgtc 1945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gtttccggttctgatgaagtcgttgaggtcagtgctcagcggtctggacgaagggccgtc 670
Query: 1946 tgtagcagagatgatgcaactattgggaaaagtgcaatcattggaaagaattaaagctgt 2005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tgtagcagagatgatgcaactattgggaaaagtgcaatcattggaaagaattaaagctgt 730
Query: 2006 cttaaga 2012
|||||||
Sbjct: 731 cttaaga 737
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 335,211
Number of extensions: 7546
Number of successful extensions: 7546
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7546
Number of HSP's successfully gapped: 1
Length of query: 2515
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2498
Effective length of database: 8,119,229
Effective search space: 20281834042
Effective search space used: 20281834042
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)