BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14516 (UTR included)
(2497 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B1F10 1148 0.0
>BF01053B1F10
Length = 639
Score = 1148 bits (579), Expect = 0.0
Identities = 597/603 (99%)
Strand = Plus / Plus
Query: 1413 gctctgaggaaactgctgacatcggacgagggtacggactcggagcaggaacagaaacaa 1472
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gctctgaggaaactgctgacgtcggacgagggtacggactcggagcaggaacagaaacaa 71
Query: 1473 gagtcggagggagaagacgagcccaccaaggagggggaggagagagcgagcaaactcacc 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gagtcggagggagaagacgagcccaccaaggagggggaggagagagcgagcaaactcacc 131
Query: 1533 aagaagaagaagaaggaagacgccaagagagacaccagcagcgacttcagctcagactcc 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aagaagaagaagaaggaagacgccaagagagacaccagcagcgacttcagctcagactcc 191
Query: 1593 gacaccgaccccgagaacagcagcaagaaacagaagaaaggaaagaacaatgacgcgaaa 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gacaccgaccccgagaacagcagcaagaaacagaagaaaggaaagaacaatgacgcgaaa 251
Query: 1653 aacaacaacgcgggtggtagcgcgagcacgtctcgctcgtgcactcccacaccttcaaac 1712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aacaacaacgcgggtggtagcgcgagcacgtctcgctcgtgcactcccacaccttcaaac 311
Query: 1713 gcgatgtccgccgtggccgcagccaacgccgccaacaaccagcccgccaagagagcgaag 1772
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gcgatgtccgccgtggccgccgccaacgccgccaacaaccagcccgccaagagagcgaag 371
Query: 1773 ctggacccctcgtatacggagtgcggcgtcacggaggaggccgtgcgccgttacttgact 1832
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 372 ctggacccctcgtatacggagtgcggcgtcacggaggaggccgtgcgacgttacttgacc 431
Query: 1833 aggaagccgatgaccaccacggagctgctgaccaagttcaagtccaagaggagcggcgtg 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aggaagccgatgaccaccacggagctgctgaccaagttcaagtccaagaggagcggcgtg 491
Query: 1893 tcctccgagaggctcgtggagaccatgacgcagatcctcaagaggatcaaccccgtcaaa 1952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tcctccgagaggctcgtggagaccatgacgcagatcctcaagaggatcaaccccgtcaaa 551
Query: 1953 cagaacatcaacggcaagatgtatcttagcatcaaacagacgtgacattaaaatgttgtt 2012
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 552 cagaacatcaatggcaagatgtatctcagcatcaaacagacgtgacattaaaatgttgtt 611
Query: 2013 ccc 2015
|||
Sbjct: 612 ccc 614
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 335,970
Number of extensions: 8482
Number of successful extensions: 8482
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8480
Number of HSP's successfully gapped: 1
Length of query: 2497
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2480
Effective length of database: 8,119,229
Effective search space: 20135687920
Effective search space used: 20135687920
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)