BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14526 (UTR included)
(6739 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B1A08 478 e-134
>BF01028B1A08
Length = 278
Score = 478 bits (241), Expect = e-134
Identities = 247/249 (99%)
Strand = Plus / Plus
Query: 6063 gatcttttaatcatcaaaaatgcgaccaacggcctgtctagcgattcagagtgctccagg 6122
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatcttttaatcataaaaaatgcgaccaacggcctgtctagcgattcagagtgctccagg 60
Query: 6123 ataagcatggacagctgcaaagatataaaggcgctcaaaaggaaaagaatcaacctgtcc 6182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataagcatggacagctgcaaagatataaaggcgctcaaaaggaaaagaatcaacctgtcc 120
Query: 6183 accgaggagttgtccccgaagaggtctaagacggatgaaatgaatttggtttattgacgg 6242
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accgaggacttgtccccgaagaggtctaagacggatgaaatgaatttggtttattgacgg 180
Query: 6243 acattcggatttatattgtaaatattattcagtcatcgctttacatatcgcataaatgta 6302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acattcggatttatattgtaaatattattcagtcatcgctttacatatcgcataaatgta 240
Query: 6303 tattcaaga 6311
|||||||||
Sbjct: 241 tattcaaga 249
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 159,455
Number of extensions: 22473
Number of successful extensions: 22473
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22473
Number of HSP's successfully gapped: 1
Length of query: 6739
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6721
Effective length of database: 8,109,745
Effective search space: 54505596145
Effective search space used: 54505596145
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)