BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14547 (UTR included)
(1279 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A2D10 1092 0.0
>BF01039A2D10
Length = 730
Score = 1092 bits (551), Expect = 0.0
Identities = 566/571 (99%)
Strand = Plus / Plus
Query: 360 ggagtttttaagaacagaaccgtcgtagcaccacctccgccagtgattatcaaaatgccg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ggagtttttaagaacagaaccgtcgtagcaccacctccgccagtgattatcaaaatgccg 219
Query: 420 ttgtgggagcttgcacaagcagccgggccattcgtcagattggcaggcctaagcggggcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ttgtgggagcttgcacaagcagccgggccattcgtcagattggcaggcctaagcggggcc 279
Query: 480 accgccgttgttttgggcgccatgggagcacaccgacattttccagaaactgatacaaag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 accgccgttgttttgggcgccatgggagcacaccgacattttccagaaactgatacaaag 339
Query: 540 gaagatcttaaaaaaatcttcgaaacagcaaacagatttcattttctacatacactggca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gaagatcttaaaaaaatcttcgaaacagcaaacagatttcattttctacatacactggca 399
Query: 600 ctaatgacggttccattatgtagaaggccatatattgcgggttcatttttcattgctggt 659
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 400 ctaatgacggttccattatgtagaaggccatatatcgcgggttcatttttcattgctggt 459
Query: 660 atggggcttttctgtggtacttgctactaccatgcttttactggtgaaagagccctacgt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 460 atggggcttttctgtggtacttgctactaccatgcttttactggtgaaagagcgctacgt 519
Query: 720 cgtctcacccctgttggaggatcctgtcttattcttgggtggcttgcaatggtattgtag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 cgtctcacccctgttggaggatcctgtcttattcttgggtggcttgcaatggtattgtag 579
Query: 780 acattttaatagaaatgtcagccatctttgttgtattagagtaattattatgtaggtaaa 839
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 580 acattttaatagaaatgtcagccgtctttgttgtattagagtaattattatgtaggtaaa 639
Query: 840 ggtgtttgtagttattcctgaattattttattaaatcataataaggtatagaacatccaa 899
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 640 ggtgtttgtagttattccagaattattttattaaatcataatagggtatagaacatccaa 699
Query: 900 aaaactgttatctttttaataattgaatatt 930
|||||||||||||||||||||||||||||||
Sbjct: 700 aaaactgttatctttttaataattgaatatt 730
Score = 252 bits (127), Expect = 1e-66
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 130 ttttatattccttgtacatttgtttactactagagttttgaaaacgcaaaaggtatggtt 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 ttttatattccttgtacatttgtttactactagagttttgaaaacgcaaaaggtatggtt 93
Query: 190 aatctcatggatacccttatgataaatacggtgacggagggggcaatgaatattttacga 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 aatctcatggatacccttatgataaatacggtgacggagggggcaatgaatattttacga 153
Query: 250 agtgttg 256
|||||||
Sbjct: 154 agtgttg 160
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 184,021
Number of extensions: 3987
Number of successful extensions: 3987
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3987
Number of HSP's successfully gapped: 2
Length of query: 1279
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1262
Effective length of database: 8,119,229
Effective search space: 10246466998
Effective search space used: 10246466998
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)