BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14548 (UTR included)
(7846 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_485_C1 2682 0.0
>BF14_485_C1
Length = 1425
Score = 2682 bits (1353), Expect = 0.0
Identities = 1389/1401 (99%)
Strand = Plus / Plus
Query: 6164 cttcaaacagaaaccgacgtctttcggtggagagatagtgaagagccagccggtggtgac 6223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cttcaaacagaaaccgacgtctttcggtggagagatagtgaagagccagccggtggtgac 61
Query: 6224 cgatcgctcgtccgacgccgcatcgagattagcgtcttccgttcgtgatgccttgaacct 6283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cgatcgctcgtccgacgccgcatcgagattagcgtcttccgttcgtgatgccttgaacct 121
Query: 6284 tgatgaggaacgatctccagagccttcagacctggagaaggaaactctaatcccgtctcc 6343
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 122 tgatgaggaacgatctccagagccttcagacctggagaaggaaactccaatcccatctcc 181
Query: 6344 agctcccgacgctacatacgtttcttgggcatgcggtctgttcccacaggcggtgggccg 6403
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 182 agcgcccgacgctacatacgtttcttggccatgcggtctgttcccacaggcggtgggccg 241
Query: 6404 caacgctagggcttcacatctatcaagagtcaaagccaaattccgcttcctcggcaaatt 6463
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 242 caacgctagggcttcacatctatcaagagtcaaagccaaattccgcttcctaggcaaatt 301
Query: 6464 tatggccaaagctgtaatggactcaaggatggtggacatacccctgtccgtgagcatgta 6523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tatggccaaagctgtaatggactcaaggatggtggacatacccctgtccgtgagcatgta 361
Query: 6524 ccgctgggtggtgtgtgagcagtcatggctagggctgagtgatgtgcgtcacgtggcacc 6583
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 362 ccgctgggtggtgtgtgagcagtcgtggctagggctgagtgatgtgcgtcacgtggcacc 421
Query: 6584 ggaactgtggcgatcgttgtgccgtctgagacgtgtggcggacagggcgcaggccatatc 6643
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 422 ggaactgtggcgatcgttgtgccgtctgagacgtgtggcggatagggcgcaggccatatc 481
Query: 6644 agcggacagcaggctcactagtgaacaacgaacacatatggtaaacgctctggagctgga 6703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agcggacagcaggctcactagtgaacaacgaacacatatggtaaacgctctggagctgga 541
Query: 6704 cggctgtcccattgaggagctcggtctagacttcattctccctggcgacggttgcaccga 6763
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 542 cggctgtcccattgaggagctcggtctagacttcatactccctggcgacggttgcaccga 601
Query: 6764 gctcaggcgtggcggccgagacctgcccgtcaccgctcacaacctgcacgagtacatcac 6823
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gctcaggcgaggcggccgagacctgcccgtcaccgctcacaacctgcacgagtacatcac 661
Query: 6824 actcgtcacacactggctgttatatgaaggtgttgttaaacagatggaagcattcaagga 6883
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 662 actcgtcacacactggctgttatatgaaggtgttgttaaacagatggaagcgttcaagga 721
Query: 6884 aggatttgagtctgtatttccattaaataatttaaaaatattttatcccgaggaattgga 6943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aggatttgagtctgtatttccattaaataatttaaaaatattttatcccgaggaattgga 781
Query: 6944 acaagttttctgtggaagtccatcaggtggtcgagaccaaagatgggatccccgtctgct 7003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 acaagttttctgtggaagtccatcaggtggtcgagaccaaagatgggatccccgtctgct 841
Query: 7004 tgctgaatgtattcgtcccgatcacggttacaacgcggagtcacgggctataaggatgct 7063
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tgctgaatgtattcgtcccgaccacggttacaacgcggagtcacgggctataaggatgct 901
Query: 7064 tattgacatattagcctcgtatagccgtgaggaacaacggcttttcttgcaattcgttac 7123
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 902 tattgacatattagcctcgtatagccgcgaggaacaacggcttttcttgcaattcgttac 961
Query: 7124 cggaagtccgcgtcttccaaccggaggtttcaaagctttgaacccgccattgaccgtagt 7183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 cggaagtccgcgtcttccaaccggaggtttcaaagctttgaacccgccattgaccgtagt 1021
Query: 7184 gcggaaatcgttggagtcctcactggacccagacgagtacctgccgtcggtgatgacctg 7243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 gcggaaatcgttggagtcctcactggacccagacgagtacctgccgtcggtgatgacctg 1081
Query: 7244 cgtcaactacctgaagctcccggactacagcagcgcggaggtgatgcgagccaaactccg 7303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 cgtcaactacctgaagctcccggactacagcagcgcggaggtgatgcgagccaaactccg 1141
Query: 7304 gctcgcggcctccgagggccagcactccttccacctctcgtaaacctcccgcccctcgcg 7363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 gctcgcggcctccgagggccagcactccttccacctctcgtaaacctcccgcccctcgcg 1201
Query: 7364 ctgaatgctcttataaatgtgtgaatgcggttagtgatacattaatagttttgttataac 7423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 ctgaatgctcttataaatgtgtgaatgcggttagtgatacattaatagttttgttataac 1261
Query: 7424 agcgcccgagctcagtgcgactgttcatgtgcaatcagagtgttttatttccttactgtg 7483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 agcgcccgagctcagtgcgactgttcatgtgcaatcagagtgttttatttccttactgtg 1321
Query: 7484 acagacactgaaagtgctgtgttctaaatatgattttgttttcatttagattcttttttt 7543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 acagacactgaaagtgctgtgttctaaatatgattttgttttcatttagattcttttttt 1381
Query: 7544 agattacagagatatgttaat 7564
|||||||||||||||||||||
Sbjct: 1382 agattacagagatatgttaat 1402
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 91,229
Number of extensions: 10719
Number of successful extensions: 10719
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10719
Number of HSP's successfully gapped: 1
Length of query: 7846
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 7828
Effective length of database: 8,109,745
Effective search space: 63483083860
Effective search space used: 63483083860
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)